RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 FLOT1O75955 427 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 HUNKP57058 714 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 ASPRV1Q53RT3 343 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 DCAF15Q66K64 600 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 C4orf32Q8N8J7 132 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 DCAF4Q8WV16 495 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 TANGO6Q9C0B7 1094 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 ASCC2Q9H1I8 757 aaPredicted RBP8.43□□□□□ -1.06
GDNF-202ENST00000344622 TMEM60Q9H2L4 133 aa8.43□□□□□ -1.06
GDNF-202ENST00000344622 SLC37A4O43826 429 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
GDNF-202ENST00000344622 CDC25AP30304 524 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 PPATQ06203 517 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 CLIC6Q96NY7 704 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 FEZ1Q99689 392 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 GOLPH3LQ9H4A5 285 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 RBM28Q9NW13 759 aaKnown RBP8.42□□□□□ -1.06
GDNF-202ENST00000344622 PPP1R9AQ9ULJ8 1098 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 A0A087WWV3 80 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 A0A087X0B3 334 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 ERO1BQ86YB8 467 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 ARHGEF10LQ9HCE6 1279 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 CWC22Q9HCG8 908 aaKnown RBP8.42□□□□□ -1.06
GDNF-202ENST00000344622 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 PIK3AP1Q6ZUJ8 805 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 LENG9Q96B70 501 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 PICK1Q9NRD5 415 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 PCDHA1Q9Y5I3 950 aa8.42□□□□□ -1.06
GDNF-202ENST00000344622 SMCO2A6NFE2 343 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 CALM1P0DP23 149 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 CALM2P0DP24 149 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 CALM3P0DP25 149 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 JAKMIP3Q5VZ66 844 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 CAVIN1Q6NZI2 390 aaKnown RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 ERCC4Q92889 916 aaPredicted RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 FAM86B1E9PN63 330 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 RGS20O76081 388 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 TDP2O95551 362 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 FAM86B2P0C5J1 330 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 GRM1Q13255 1194 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 INF2Q27J81 1249 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 GPATCH4Q5T3I0 446 aaKnown RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 GADL1Q6ZQY3 521 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 NOSTRINQ8IVI9 506 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 FAM184AQ8NB25 1140 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 WDR46O15213 610 aaKnown RBP8.41□□□□□ -1.06
GDNF-202ENST00000344622 DSG3P32926 999 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 PPIL2Q13356 520 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 GAS2L3Q86XJ1 694 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
GDNF-202ENST00000344622 PP2D1A8MPX8 630 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 TOMM70O94826 608 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 MARCKSP29966 332 aaPredicted RBP8.4□□□□□ -1.06
GDNF-202ENST00000344622 HMGN5P82970 282 aaKnown RBP8.4□□□□□ -1.06
GDNF-202ENST00000344622 CNTN2Q02246 1040 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 HOOK2Q96ED9 719 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 SLF1Q9BQI6 1058 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 ARHGAP39Q9C0H5 1083 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 ADGRA2Q96PE1 1338 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 DHX16O60231 1041 aaKnown RBP8.4□□□□□ -1.06
GDNF-202ENST00000344622 ATP2B1P20020 1258 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 KIF5BP33176 963 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 NUCB2P80303 420 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 AXDND1Q5T1B0 1012 aaPredicted RBP8.4□□□□□ -1.06
GDNF-202ENST00000344622 LBX2Q6XYB7 198 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.06
GDNF-202ENST00000344622 PCDHA4Q9UN74 947 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 CSADQ9Y600 493 aa8.4□□□□□ -1.06
GDNF-202ENST00000344622 HOXA7P31268 230 aaPredicted RBP8.4□□□□□ -1.07
GDNF-202ENST00000344622 NAPAP54920 295 aa8.4□□□□□ -1.07
GDNF-202ENST00000344622 MRPS9P82933 396 aaKnown RBP8.4□□□□□ -1.07
GDNF-202ENST00000344622 SF3A1Q15459 793 aaKnown RBP8.4□□□□□ -1.07
GDNF-202ENST00000344622 LEO1Q8WVC0 666 aaPredicted RBP8.4□□□□□ -1.07
GDNF-202ENST00000344622 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.07
GDNF-202ENST00000344622 PDHXO00330 501 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 PGK2P07205 417 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 LIG1P18858 919 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 ZNF157P51786 506 aaPredicted RBP8.39□□□□□ -1.07
GDNF-202ENST00000344622 HERVK_113P62684 666 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 IKQ13123 557 aaPredicted RBP8.39□□□□□ -1.07
GDNF-202ENST00000344622 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
GDNF-202ENST00000344622 LINC00301Q8NCQ3 95 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 LPAR1Q92633 364 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 HAS1Q92839 578 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 RRP36Q96EU6 259 aaKnown RBP8.39□□□□□ -1.07
GDNF-202ENST00000344622 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 AGTPBP1Q9UPW5 1226 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 ADCY6O43306 1168 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 ICAM1P05362 532 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 SMARCA1P28370 1054 aa8.39□□□□□ -1.07
GDNF-202ENST00000344622 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
GDNF-202ENST00000344622 ECM1Q16610 540 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms