RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SEPT4O43236 478 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 STRNO43815 780 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CDKL5O76039 1030 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 ADORA2AP29274 412 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 SHMT1P34896 483 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 METAP2P50579 478 aaKnown RBP eCLIP15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 PDE4BQ07343 736 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 WTAPQ15007 396 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 C1orf53Q5VUE5 145 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 NFXL1Q6ZNB6 911 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 TTC6Q86TZ1 520 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 RGS22Q8NE09 1264 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 UBAC1Q9BSL1 405 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 MOV10L1Q9BXT6 1211 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 TTYH1Q9H313 450 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 NCOA5Q9HCD5 579 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CABP5Q9NP86 173 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 PDLIM7Q9NR12 457 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 LMBRD1Q9NUN5 540 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CDH23Q9H251 3354 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CPLX1O14810 134 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 ZBTB43O43298 467 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 TRIM60Q495X7 471 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CPLX2Q6PUV4 134 aaKnown RBP15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 DPP9Q86TI2 863 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 SHCBP1Q8NEM2 672 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 BADQ92934 168 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 MCM9Q9NXL9 1143 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 CYP2D7A0A087X1C5 515 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 GOLGA8AA7E2F4 631 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 PLCD1P51178 756 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 GABPAQ06546 454 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 GSE1Q14687 1217 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 COG2Q14746 738 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 CSPP1Q1MSJ5 1256 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 KLHL40Q2TBA0 621 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 C12orf60Q5U649 245 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 IQCA1Q86XH1 822 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 MYLIPQ8WY64 445 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 SPATC1LQ9H0A9 340 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 PRDM5Q9NQX1 630 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 SLC12A7Q9Y666 1083 aa15.61■□□□□ 0.09
HERPUD1-202ENST00000344114 BAZ2BQ9UIF8 2168 aaKnown RBP15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 SMCHD1A6NHR9 2005 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 PLXNA1Q9UIW2 1896 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 TNKSO95271 1327 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 TMEM265A0A087WTH1 108 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 TRIM43BA6NCK2 446 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 H3BQV1 296 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 COBLO75128 1261 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 LRRC41Q15345 812 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 SEC23AQ15436 765 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 ANO1Q5XXA6 986 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 SH3RF1Q7Z6J0 888 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 TRIM43Q96BQ3 446 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 DDX11Q96FC9 970 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 HOXC10Q9NYD6 342 aa15.6■□□□□ 0.09
HERPUD1-202ENST00000344114 STK36Q9NRP7 1315 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 A0A1W2PRG0 241 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 MBD3O95983 291 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 ERCC3P19447 782 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 SEPT2Q15019 361 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 PPP2R5BQ15173 497 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 MICU3Q86XE3 530 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 STK11IPQ8N1F8 1099 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 ZSCAN16Q9H4T2 348 aaPredicted RBP15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 PRDM6Q9NQX0 595 aa15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 DDX49Q9Y6V7 483 aaKnown RBP15.59■□□□□ 0.09
HERPUD1-202ENST00000344114 RANBP6O60518 1105 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 PRPF40AO75400 957 aaKnown RBP15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 CYP2D6P10635 497 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 ADCYAP1R1P41586 468 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 FAM47AQ5JRC9 791 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 ABRAQ8N0Z2 381 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 MB21D1Q8N884 522 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 ZSCAN10Q96SZ4 725 aaPredicted RBP15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 ZNF287Q9HBT7 754 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 SENP2Q9HC62 589 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 SLC5A4Q9NY91 659 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 ORC3Q9UBD5 711 aaPredicted RBP15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 PHF24Q9UPV7 400 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 PRUNE2Q8WUY3 3088 aa15.58■□□□□ 0.08
HERPUD1-202ENST00000344114 CCDC196A0A1B0GTZ2 297 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 DTNBO60941 627 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 FOSL2P15408 326 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 ITGB8P26012 769 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 DSG3P32926 999 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 CCDC178Q5BJE1 867 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 PRAMEF19Q5SWL8 479 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 MAML3Q96JK9 1138 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 ZKSCAN3Q9BRR0 538 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 MROH8Q9H579 483 aa15.57■□□□□ 0.08
HERPUD1-202ENST00000344114 SMIM22K7EJ46 135 aa15.56■□□□□ 0.08
HERPUD1-202ENST00000344114 DDAH1O94760 285 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms