RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 SLC16A2P36021 539 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 LRMPQ12912 555 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
CLDN18-202ENST00000343735 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
CLDN18-202ENST00000343735 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 MRVI1Q9Y6F6 885 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 TRIM75PA6NK02 468 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 STXBP3O00186 592 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
CLDN18-202ENST00000343735 ARID5BQ14865 1188 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 CDC37Q16543 378 aaPredicted RBP11.13□□□□□ -0.63
CLDN18-202ENST00000343735 WWC2Q6AWC2 1192 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 NOSTRINQ8IVI9 506 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
CLDN18-202ENST00000343735 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 STK38Q15208 465 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 FBXO11Q86XK2 927 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 ZNF408Q9H9D4 720 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 ELP3Q9H9T3 547 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 ZKSCAN5Q9Y2L8 839 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 MYPNQ86TC9 1320 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 PAPPA2Q9BXP8 1791 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 AP5Z1O43299 807 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 ZBED4O75132 1171 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 VCAM1P19320 739 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 RILPL1Q5EBL4 403 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 STAMQ92783 540 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 HOXC10Q9NYD6 342 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 SMCO2A6NFE2 343 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 UBE2HP62256 183 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 SLC35G1Q2M3R5 365 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 QRICH1Q2TAL8 776 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 KIFC2Q96AC6 838 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 RANBP17Q9H2T7 1088 aaKnown RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 TRMT1Q9NXH9 659 aaKnown RBP11.12□□□□□ -0.63
CLDN18-202ENST00000343735 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 MYH6P13533 1939 aa11.12□□□□□ -0.63
CLDN18-202ENST00000343735 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
CLDN18-202ENST00000343735 ADCY7P51828 1080 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 HMGCS2P54868 508 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 LEO1Q8WVC0 666 aaPredicted RBP11.11□□□□□ -0.63
CLDN18-202ENST00000343735 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CLDN18-202ENST00000343735 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 CPVLQ9H3G5 476 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 FLOT1O75955 427 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 TRAPPC10P48553 1259 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 SASS6Q6UVJ0 657 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 CUL5Q93034 780 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
CLDN18-202ENST00000343735 BTBD18B2RXH4 712 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 TRAF5O00463 557 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 BMP15O95972 392 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 PTGS1P23219 599 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 GOLGA8FQ08AF8 430 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 GOLGA8DPQ0D2H9 430 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 SNAPC2Q13487 334 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 COG2Q14746 738 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 KIAA1755Q5JYT7 1200 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 MYSM1Q5VVJ2 828 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 SAMD3Q8N6K7 520 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 MAF1Q9H063 256 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 MRPL11Q9Y3B7 192 aaKnown RBP11.1□□□□□ -0.63
CLDN18-202ENST00000343735 CLIC4Q9Y696 253 aa11.1□□□□□ -0.63
CLDN18-202ENST00000343735 ABCB11O95342 1321 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms