RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NPY5RQ15761 445 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 DEFB115Q30KQ5 88 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 TKFCQ3LXA3 575 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 MCTP2Q6DN12 878 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 REM2Q8IYK8 340 aaPredicted RBP18.77■□□□□ 0.6
SNED1-202ENST00000342631 CUL5Q93034 780 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.6
SNED1-202ENST00000342631 RESTQ13127 1097 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 NOGQ13253 232 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 USH1GQ495M9 461 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 PSTPIP2Q9H939 334 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 ZNF214Q9UL59 606 aaPredicted RBP18.76■□□□□ 0.59
SNED1-202ENST00000342631 RABGAP1Q9Y3P9 1069 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 GCLCP48506 637 aaPredicted RBP18.76■□□□□ 0.59
SNED1-202ENST00000342631 CPXCR1Q8N123 301 aa18.76■□□□□ 0.59
SNED1-202ENST00000342631 PARK7Q99497 189 aaKnown RBP18.76■□□□□ 0.59
SNED1-202ENST00000342631 RAVER2Q9HCJ3 691 aaKnown RBP18.76■□□□□ 0.59
SNED1-202ENST00000342631 BTBD18B2RXH4 712 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 COPB2P35606 906 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 STAT3P40763 770 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 TMEM132BQ14DG7 1078 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 NOSTRINQ8IVI9 506 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 AGBL1Q96MI9 1066 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 PTPN18Q99952 460 aa18.75■□□□□ 0.59
SNED1-202ENST00000342631 MAP3K20Q9NYL2 800 aaKnown RBP18.75■□□□□ 0.59
SNED1-202ENST00000342631 M0R2N6 131 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 TM4SF4P48230 202 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 MCF2L2Q86YR7 1114 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 REXO1Q8N1G1 1221 aaKnown RBP18.74■□□□□ 0.59
SNED1-202ENST00000342631 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 PIK3CDO00329 1044 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
SNED1-202ENST00000342631 SNRNP48Q6IEG0 339 aaKnown RBP18.74■□□□□ 0.59
SNED1-202ENST00000342631 PAXIP1Q6ZW49 1069 aaPredicted RBP18.74■□□□□ 0.59
SNED1-202ENST00000342631 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
SNED1-202ENST00000342631 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
SNED1-202ENST00000342631 GHRHRQ02643 423 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 FOXD4L5Q5VV16 416 aaPredicted RBP18.73■□□□□ 0.59
SNED1-202ENST00000342631 CYP4F22Q6NT55 531 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 CLEC17AQ6ZS10 378 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 KRT25Q7Z3Z0 450 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 IFNL1Q8IU54 200 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 RIOX2Q8IUF8 465 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 OXER1Q8TDS5 423 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 FOXD4L4Q8WXT5 416 aaPredicted RBP18.73■□□□□ 0.59
SNED1-202ENST00000342631 TNFRSF25Q93038 417 aa18.73■□□□□ 0.59
SNED1-202ENST00000342631 KIF28PB7ZC32 967 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 SLC25A27O95847 323 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 ALAS1P13196 640 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 NR5A1Q13285 461 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 CHST13Q8NET6 341 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 CAPNS2Q96L46 248 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 TRERF1Q96PN7 1200 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 SPATC1LQ9H0A9 340 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 BTBD7Q9P203 1132 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 FBXO40Q9UH90 709 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 SMCHD1A6NHR9 2005 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 FOSP01100 380 aaPredicted RBP18.72■□□□□ 0.59
SNED1-202ENST00000342631 CLK2P49760 499 aaKnown RBP18.72■□□□□ 0.59
SNED1-202ENST00000342631 AP3B2Q13367 1082 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 RBPJLQ9UBG7 517 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 PCDHA6Q9UN73 950 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 PCDHA8Q9Y5H6 950 aa18.72■□□□□ 0.59
SNED1-202ENST00000342631 CCDC194A0A1B0GVG4 234 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 GCOM1H8Y6P7 765 aaPredicted RBP18.71■□□□□ 0.59
SNED1-202ENST00000342631 MEIS2O14770 477 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 OPLAHO14841 1288 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 ALDH1A1P00352 501 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 POLR2MP0CAP2 368 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 CYP2C8P10632 490 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 PLS1Q14651 629 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 RILPL1Q5EBL4 403 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 POTEEQ6S8J3 1075 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 CLEC4DQ8WXI8 215 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 ZNF396Q96N95 335 aaPredicted RBP18.71■□□□□ 0.59
SNED1-202ENST00000342631 MYH15Q9Y2K3 1946 aa18.71■□□□□ 0.59
SNED1-202ENST00000342631 RBBP6Q7Z6E9 1792 aaKnown RBP18.71■□□□□ 0.59
SNED1-202ENST00000342631 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNED1-202ENST00000342631 CNMDO75829 334 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 TRAPPC10P48553 1259 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 CCNA1P78396 465 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 MYSM1Q5VVJ2 828 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 ACAD9Q9H845 621 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 RNF146Q9NTX7 359 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 MORF4L1Q9UBU8 362 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 HSD17B4P51659 736 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 ERVK-9P63128 1117 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 ERVK-24P63145 666 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
SNED1-202ENST00000342631 SHCBP1Q8NEM2 672 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 GPRC5AQ8NFJ5 357 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 GBP4Q96PP9 640 aa18.7■□□□□ 0.58
SNED1-202ENST00000342631 NOL7Q9UMY1 257 aaKnown RBP18.7■□□□□ 0.58
SNED1-202ENST00000342631 NONOQ15233 471 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNED1-202ENST00000342631 BIN2Q9UBW5 565 aaPredicted RBP18.69■□□□□ 0.58
SNED1-202ENST00000342631 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
SNED1-202ENST00000342631 RIPK3Q9Y572 518 aa18.69■□□□□ 0.58
SNED1-202ENST00000342631 CFBP00751 764 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms