RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IKQ13123 557 aaPredicted RBP22.67■■□□□ 1.22
RTN1-202ENST00000342503 RASA3Q14644 834 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 BTNL9Q6UXG8 535 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 SPICE1Q8N0Z3 855 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 SPC24Q8NBT2 197 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 PSTPIP2Q9H939 334 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 PCDHA1Q9Y5I3 950 aa22.67■■□□□ 1.22
RTN1-202ENST00000342503 EDIL3O43854 480 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 CDC25AP30304 524 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 CAP2P40123 477 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 TXLNAP40222 546 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 MORC3Q14149 939 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 NCAPHQ15003 741 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 KIAA1755Q5JYT7 1200 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 PDXDC2PQ6P474 469 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 SPATA20Q8TB22 786 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 DPF2Q92785 391 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.66■■□□□ 1.22
RTN1-202ENST00000342503 ZKSCAN5Q9Y2L8 839 aa22.66■■□□□ 1.22
RTN1-202ENST00000342503 SMC2O95347 1197 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 SAMD7Q7Z3H4 446 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 GOPCQ9HD26 462 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
RTN1-202ENST00000342503 PP2D1A8MPX8 630 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 MSNP26038 577 aaKnown RBP22.65■■□□□ 1.22
RTN1-202ENST00000342503 TBC1D10BQ4KMP7 808 aaPredicted RBP22.65■■□□□ 1.22
RTN1-202ENST00000342503 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.65■■□□□ 1.22
RTN1-202ENST00000342503 TRIML1Q8N9V2 468 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 GLT8D2Q9H1C3 349 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.65■■□□□ 1.22
RTN1-202ENST00000342503 ZNF541Q9H0D2 1346 aa22.65■■□□□ 1.22
RTN1-202ENST00000342503 IKBKBO14920 756 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 CASP1P29466 404 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 DPYDQ12882 1025 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 TNFAIP1Q13829 316 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 KARSQ15046 597 aaKnown RBP22.64■■□□□ 1.21
RTN1-202ENST00000342503 TEPSINQ96N21 525 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 AMNQ9BXJ7 453 aa22.64■■□□□ 1.21
RTN1-202ENST00000342503 TDP2O95551 362 aa22.63■■□□□ 1.21
RTN1-202ENST00000342503 FBXO11Q86XK2 927 aa22.63■■□□□ 1.21
RTN1-202ENST00000342503 STAMQ92783 540 aa22.63■■□□□ 1.21
RTN1-202ENST00000342503 CCSER1Q9C0I3 900 aa22.63■■□□□ 1.21
RTN1-202ENST00000342503 PRR12Q9ULL5 1215 aa22.63■■□□□ 1.21
RTN1-202ENST00000342503 ASTN2O75129 1339 aaPredicted RBP22.63■■□□□ 1.21
RTN1-202ENST00000342503 GOLGA6L6A8MZA4 724 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 CDC25BP30305 580 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 UBA7P41226 1012 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 TPM4P67936 248 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 FAM83BQ5T0W9 1011 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 ZNF830Q96NB3 372 aaPredicted RBP22.62■■□□□ 1.21
RTN1-202ENST00000342503 DISC1Q9NRI5 854 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 PHF20L1A8MW92 1017 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L15C9J2P7 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L13C9JLJ4 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L11C9JVI0 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L18D6R9N7 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L22D6RA61 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L17D6RBQ6 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L19D6RCP7 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L20D6RJB6 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 SLC37A4O43826 429 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 STAT6P42226 847 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L24Q0WX57 530 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 CALCRLQ16602 461 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 USP17L6PQ6QN14 398 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 DRC7Q8IY82 874 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 MLKLQ8NB16 471 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 MRFAP1L1Q96HT8 127 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 AK8Q96MA6 479 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 MTMR9Q96QG7 549 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 HACL1Q9UJ83 578 aa22.62■■□□□ 1.21
RTN1-202ENST00000342503 DICER1Q9UPY3 1922 aaKnown RBP22.62■■□□□ 1.21
RTN1-202ENST00000342503 CLCN1P35523 988 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 STAT2P52630 851 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 MYL5Q02045 173 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 KIF4BQ2VIQ3 1234 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 USH1GQ495M9 461 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 MTRQ99707 1265 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 VCPKMTQ9H867 229 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 DACH1Q9UI36 760 aa22.61■■□□□ 1.21
RTN1-202ENST00000342503 GTPBP6O43824 516 aaPredicted RBP22.6■■□□□ 1.21
RTN1-202ENST00000342503 ASNSP08243 561 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 TECP42680 631 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 ZYXQ15942 572 aaKnown RBP22.6■■□□□ 1.21
RTN1-202ENST00000342503 RRAGBQ5VZM2 374 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 CCDC84Q86UT8 332 aaPredicted RBP22.6■■□□□ 1.21
RTN1-202ENST00000342503 RASSF8Q8NHQ8 419 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 GLIS2Q9BZE0 524 aaPredicted RBP22.6■■□□□ 1.21
RTN1-202ENST00000342503 HSD3B7Q9H2F3 369 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 BLZF1Q9H2G9 400 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 SH2D4AQ9H788 454 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 TPM3P06753 285 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 TXKP42681 527 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 PPP4R3AQ6IN85 833 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 CABP7Q86V35 215 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 GSDMAQ96QA5 445 aa22.6■■□□□ 1.21
RTN1-202ENST00000342503 TTC12Q9H892 705 aaPredicted RBP22.6■■□□□ 1.21
RTN1-202ENST00000342503 MEIS2O14770 477 aa22.59■■□□□ 1.21
RTN1-202ENST00000342503 TAL1P17542 331 aaPredicted RBP22.59■■□□□ 1.21
RTN1-202ENST00000342503 CUL4BQ13620 913 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms