RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 GGCXP38435 758 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 PAK2Q13177 524 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 SGMS1Q86VZ5 419 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 SLF2Q8IX21 1173 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 COL15A1P39059 1388 aa13.76□□□□□ -0.21
SNRNP48-201ENST00000342415 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 H2AFXP16104 143 aaPredicted RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 CYP4A11Q02928 519 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ERMNQ8TAM6 284 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 PEX26Q7Z412 305 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ARFGAP2Q8N6H7 521 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 FAM13AO94988 1023 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 HEXIM1O94992 359 aaKnown RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ADCY7P51828 1080 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 SIK1P57059 783 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 CETN1Q12798 172 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 PDCLQ13371 301 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 NR1I3Q14994 352 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 DISC1Q9NRI5 854 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 AGPAT5Q9NUQ2 364 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 TBC1D5Q92609 795 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 PNKPQ96T60 521 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ADD3Q9UEY8 706 aaKnown RBP13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 ADAMTS1Q9UHI8 967 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
SNRNP48-201ENST00000342415 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 GYPCP04921 128 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 MECOMQ03112 1051 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 GBP6Q6ZN66 633 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 MYOCDQ8IZQ8 938 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 RPGRIP1Q96KN7 1286 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 ZC3H12CQ9C0D7 883 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 PCDHA12Q9UN75 941 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 BUB1BO60566 1050 aaPredicted RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 TCP1P17987 556 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 EEF1GP26641 437 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 SLC16A2P36021 539 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 PCDHA4Q9UN74 947 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 PACSIN2Q9UNF0 486 aaPredicted RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 A0A1B0GTH6 734 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 FCER1AP12319 257 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 TOB1P50616 345 aaPredicted RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 CCDC155Q8N6L0 562 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 PIGSQ96S52 555 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 NFU1Q9UMS0 254 aa13.74□□□□□ -0.21
SNRNP48-201ENST00000342415 DDAH1O94760 285 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 IFT88Q13099 833 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 GPBP1Q86WP2 473 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 TAOK3Q9H2K8 898 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 GCNT3O95395 438 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 NF2P35240 595 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 KIF11P52732 1056 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 SP4Q02446 784 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 SRBD1Q8N5C6 995 aaKnown RBP13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 MGARPQ8TDB4 240 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 GJA10Q969M2 543 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 EIF3CLB5ME19 914 aaKnown RBP13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 SMIM22K7EJ46 135 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 ZBED6P86452 979 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 TBC1D10BQ4KMP7 808 aaPredicted RBP13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 TRIM65Q6PJ69 517 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 PROCA1Q8NCQ7 364 aaPredicted RBP13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 EIF3CQ99613 913 aaKnown RBP13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 MYO1AQ9UBC5 1043 aa13.73□□□□□ -0.21
SNRNP48-201ENST00000342415 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 SASH3O75995 380 aa13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 IL6STP40189 918 aaPredicted RBP13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 KLK7P49862 253 aa13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 TMC4Q7Z404 712 aa13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
SNRNP48-201ENST00000342415 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms