RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ADAT2Q7Z6V5 191 aaKnown RBP14□□□□□ -0.17
LMX1A-202ENST00000342310 REXO1Q8N1G1 1221 aaKnown RBP14□□□□□ -0.17
LMX1A-202ENST00000342310 CWC15Q9P013 229 aaKnown RBP14□□□□□ -0.17
LMX1A-202ENST00000342310 MOCS3O95396 460 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 TDP2O95551 362 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF76P36508 570 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 SPICE1Q8N0Z3 855 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 RABGGTAQ92696 567 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 MTRQ99707 1265 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 PCDHA4Q9UN74 947 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 CNTNAP5Q8WYK1 1306 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 STK36Q9NRP7 1315 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 COL5A2P05997 1499 aaPredicted RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 GUCY2FP51841 1108 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 UBXN2AP68543 259 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 RASSF7Q02833 373 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 PFKFB3Q16875 520 aaPredicted RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 TMEM266Q2M3C6 531 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF658Q5TYW1 1059 aaPredicted RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 TMEM139Q8IV31 216 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF384Q8TF68 577 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 IFIH1Q9BYX4 1025 aaKnown RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 H3BQF6 201 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 ATP2C2O75185 946 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 CALCRLQ16602 461 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 HERC4Q5GLZ8 1057 aaPredicted RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 SV2BQ7L1I2 683 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 RDH13Q8NBN7 331 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 IPO4Q8TEX9 1081 aaKnown RBP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 CEP95Q96GE4 821 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 MMS19Q96T76 1030 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 LACRTQ9GZZ8 138 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 GOLPH3Q9H4A6 298 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
LMX1A-202ENST00000342310 KRT79Q5XKE5 535 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 KLHL7Q8IXQ5 586 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 TRIM31Q9BZY9 425 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 ACBD3Q9H3P7 528 aa13.99□□□□□ -0.17
LMX1A-202ENST00000342310 USO1O60763 962 aaKnown RBP13.98□□□□□ -0.17
LMX1A-202ENST00000342310 OR52Z1P0C646 297 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 ATP1A2P50993 1020 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 MSL1Q68DK7 614 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 ANKRD40Q6AI12 368 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 ARPP21Q9UBL0 812 aaPredicted RBP13.98□□□□□ -0.17
LMX1A-202ENST00000342310 PNPLA7Q6ZV29 1317 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 LRRC37A3O60309 1634 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 TRAPPC3LQ5T215 181 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 KIAA0825Q8IV33 1275 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 SCAF8Q9UPN6 1271 aaKnown RBP13.98□□□□□ -0.17
LMX1A-202ENST00000342310 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
LMX1A-202ENST00000342310 SFI1A8K8P3 1242 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP8P40818 1118 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 MAGEA1P43355 309 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 CASP8Q14790 479 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 CCDC93Q567U6 631 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 MB21D1Q8N884 522 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 GLIS3Q8NEA6 775 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 FAM204AQ9H8W3 233 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 NHEJ1Q9H9Q4 299 aaPredicted RBP13.98□□□□□ -0.17
LMX1A-202ENST00000342310 TMEM51Q9NW97 253 aa13.98□□□□□ -0.17
LMX1A-202ENST00000342310 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 DDAH1O94760 285 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 FTCDO95954 541 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF804AQ7Z570 1209 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 KSR1Q8IVT5 923 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 FNBP4Q8N3X1 1017 aaPredicted RBP13.97□□□□□ -0.17
LMX1A-202ENST00000342310 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 IL17RBQ9NRM6 502 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 ATP8A2Q9NTI2 1148 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
LMX1A-202ENST00000342310 ARHGEF1Q92888 912 aaKnown RBP13.97□□□□□ -0.17
LMX1A-202ENST00000342310 SECISBP2LQ93073 1101 aaKnown RBP13.97□□□□□ -0.17
LMX1A-202ENST00000342310 SPAG5Q96R06 1193 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 UBAP1LF5GYI3 381 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 H0YHG0 523 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 LDHCP07864 332 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 GNA11P29992 359 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 PAFAH1B1P43034 410 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 CDK8P49336 464 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
LMX1A-202ENST00000342310 AMPD3Q01432 767 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 NEK8Q86SG6 692 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 TXLNBQ8N3L3 684 aa13.97□□□□□ -0.17
LMX1A-202ENST00000342310 RWDD2AQ9UIY3 292 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms