RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 BFSP1Q12934 665 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 EDC3Q96F86 508 aaKnown RBP16.67■□□□□ 0.26
COL11A2-201ENST00000341947 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 NSFP46459 744 aaKnown RBP16.67■□□□□ 0.26
COL11A2-201ENST00000341947 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
COL11A2-201ENST00000341947 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
COL11A2-201ENST00000341947 PFKFB2O60825 505 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 RNF10Q8N5U6 811 aaKnown RBP16.66■□□□□ 0.26
COL11A2-201ENST00000341947 BBOF1Q8ND07 529 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 AP5M1Q9H0R1 490 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 NUB1Q9Y5A7 615 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 KIAA0556O60303 1618 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 ZNF804BA4D1E1 1349 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 BUB1O43683 1085 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
COL11A2-201ENST00000341947 ATF2P15336 505 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 MYL7Q01449 175 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 VCX3AQ9NNX9 186 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 TCOF1Q13428 1488 aaKnown RBP16.66■□□□□ 0.26
COL11A2-201ENST00000341947 LMNB1P20700 586 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 USP14P54578 494 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 TRIML1Q8N9V2 468 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 ANAPC5Q9UJX4 755 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 XPAP23025 273 aaPredicted RBP16.66■□□□□ 0.26
COL11A2-201ENST00000341947 LONP1P36776 959 aaKnown RBP16.66■□□□□ 0.26
COL11A2-201ENST00000341947 BBS5Q8N3I7 341 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 DISC1Q9NRI5 854 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 HAUS8Q9BT25 410 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 XDHP47989 1333 aa16.66■□□□□ 0.26
COL11A2-201ENST00000341947 ZNF445P59923 1031 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 IRX4P78413 519 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 USPL1Q5W0Q7 1092 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 METTL23Q86XA0 190 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 MAP7D3Q8IWC1 876 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 ANKRD36BP1Q96IX9 119 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
COL11A2-201ENST00000341947 AKT3Q9Y243 479 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 PCDHA1Q9Y5I3 950 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 THAP12O43422 761 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 IGSF3O75054 1194 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
COL11A2-201ENST00000341947 MFAP3P55082 362 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 SLC39A2Q9NP94 309 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 HOMER3Q9NSC5 361 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 A0A0D9SFI3 127 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 SEMA3EO15041 775 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 FAM26FQ5R3K3 315 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 TTLL7Q6ZT98 887 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 ARHGAP42A6NI28 874 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 SF3A3Q12874 501 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL11A2-201ENST00000341947 CDKL2Q92772 493 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 CTTNBP2Q8WZ74 1663 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 VPS41P49754 854 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 BPIFB4P59827 614 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 FAM71BQ8TC56 605 aa16.65■□□□□ 0.26
COL11A2-201ENST00000341947 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 SAT1P21673 171 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 CCDC38Q502W7 563 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 JADE1Q6IE81 842 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 AMNQ9BXJ7 453 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 MAGEF1Q9HAY2 307 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 H7C0C1 242 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 ATP5OP48047 213 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 KAZNQ674X7 775 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 MIS18BP1Q6P0N0 1132 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 TSC1Q92574 1164 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 OAS2P29728 719 aaKnown RBP16.64■□□□□ 0.25
COL11A2-201ENST00000341947 RFC1P35251 1148 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-201ENST00000341947 ARHGAP4P98171 946 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 PTK2Q05397 1052 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 TSTA3Q13630 321 aaPredicted RBP16.64■□□□□ 0.25
COL11A2-201ENST00000341947 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 ECE1P42892 770 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 CAPN12Q6ZSI9 719 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 HDAC11Q96DB2 347 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 BAG5Q9UL15 447 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 PCDHB4Q9Y5E5 795 aa16.64■□□□□ 0.25
COL11A2-201ENST00000341947 HMGB1P1B2RPK0 211 aaPredicted RBP16.63■□□□□ 0.25
COL11A2-201ENST00000341947 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 ODR4Q5SWX8 454 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 RFX6Q8HWS3 928 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 ADCY9O60503 1353 aa16.63■□□□□ 0.25
COL11A2-201ENST00000341947 DTNBO60941 627 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms