RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 PPP1R11O60927 126 aaPredicted RBP12.51□□□□□ -0.41
TRIM29-201ENST00000341846 BMP15O95972 392 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 GYS2P54840 703 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 DPYDQ12882 1025 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 RRAGBQ5VZM2 374 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 CPLX3Q8WVH0 158 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 ZNF446Q9NWS9 450 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 MYH1P12882 1939 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 NAV1Q8NEY1 1877 aa12.51□□□□□ -0.41
TRIM29-201ENST00000341846 M0R2N6 131 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 GH2P01242 217 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 GNA11P29992 359 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
TRIM29-201ENST00000341846 BPIFA3Q9BQP9 254 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 SH3GLB2Q9NR46 395 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 PI4KBQ9UBF8 816 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 CTNND2Q9UQB3 1225 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
TRIM29-201ENST00000341846 TRIM66O15016 1216 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 NEMFO60524 1076 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 TXLNAP40222 546 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 SYCP1Q15431 976 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 LZTS2Q9BRK4 669 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 PSMD14O00487 310 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 IKBKBO14920 756 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 SFPQP23246 707 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM29-201ENST00000341846 CYP2C19P33261 490 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 RRP1BQ14684 758 aaKnown RBP12.5□□□□□ -0.41
TRIM29-201ENST00000341846 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 HPS3Q969F9 1004 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 LAMB1P07942 1786 aa12.5□□□□□ -0.41
TRIM29-201ENST00000341846 PES1O00541 588 aaKnown RBP12.49□□□□□ -0.41
TRIM29-201ENST00000341846 MARCH6O60337 910 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 ICA1Q05084 483 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 MLKLQ8NB16 471 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 CCDC12Q8WUD4 166 aaPredicted RBP12.49□□□□□ -0.41
TRIM29-201ENST00000341846 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 MAST2Q6P0Q8 1798 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 POTEMA6NI47 508 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 SLC37A4O43826 429 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 ERCC3P19447 782 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 CDC25BP30305 580 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
TRIM29-201ENST00000341846 ADCY7P51828 1080 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
TRIM29-201ENST00000341846 E2F4Q16254 413 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 INTS13Q9NVM9 706 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 CCZ1BP86790 482 aa12.49□□□□□ -0.41
TRIM29-201ENST00000341846 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
TRIM29-201ENST00000341846 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
TRIM29-201ENST00000341846 TEX33O43247 280 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 ECE1P42892 770 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 ERCC6LQ2NKX8 1250 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 TRIM49BA6NDI0 452 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 OR52Z1P0C646 297 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 PLCG1P19174 1290 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
TRIM29-201ENST00000341846 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 KRT25Q7Z3Z0 450 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
TRIM29-201ENST00000341846 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
TRIM29-201ENST00000341846 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 F5H6K3 240 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
TRIM29-201ENST00000341846 KLRC3Q07444 240 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 OGFOD1Q8N543 542 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 TMEM39BQ9GZU3 492 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 PTPN14Q15678 1187 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 CABP7Q86V35 215 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 SIAH1Q8IUQ4 282 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 PSTPIP2Q9H939 334 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 LCMT1Q9UIC8 334 aa12.47□□□□□ -0.41
TRIM29-201ENST00000341846 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms