RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF507Q8TCN5 953 aa16.35■□□□□ 0.21
TDP2-201ENST00000341060 SEC31AO94979 1220 aaKnown RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 PLCG2P16885 1265 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 GPSM2P81274 684 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 TXNRD1Q16881 649 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 TTI2Q6NXR4 508 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 CEP112Q8N8E3 955 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 PARD6BQ9BYG5 372 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 LRRC37AA6NMS7 1700 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 CCNT1O60563 726 aaKnown RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 TBC1D8O95759 1140 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 PLCG1P19174 1290 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 ARHGAP25P42331 645 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 CABP7Q86V35 215 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 SLC35F6Q8N357 371 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 NOC3LQ8WTT2 800 aaKnown RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 DHTKD1Q96HY7 919 aaPredicted RBP16.34■□□□□ 0.21
TDP2-201ENST00000341060 PLIN2Q99541 437 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
TDP2-201ENST00000341060 TTC26A0AVF1 554 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 SMCO2A6NFE2 343 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 UFL1O94874 794 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 ABL1P00519 1130 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 NOVP48745 357 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.21
TDP2-201ENST00000341060 LETM2Q2VYF4 491 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 SLC27A3Q5K4L6 730 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 NEK8Q86SG6 692 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 FAM163AQ96GL9 167 aaPredicted RBP16.33■□□□□ 0.21
TDP2-201ENST00000341060 TRIM9Q9C026 710 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 ARFGAP3Q9NP61 516 aa16.33■□□□□ 0.21
TDP2-201ENST00000341060 SEC63Q9UGP8 760 aaKnown RBP16.33■□□□□ 0.21
TDP2-201ENST00000341060 CCDC151A5D8V7 595 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 ATP2B4P23634 1241 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 RHBDL3P58872 404 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 TUBB4BP68371 445 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 KIF4BQ2VIQ3 1234 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 USP17L2Q6R6M4 530 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 CEP95Q96GE4 821 aa16.33■□□□□ 0.2
TDP2-201ENST00000341060 LUC7L2Q9Y383 392 aaKnown RBP16.33■□□□□ 0.2
TDP2-201ENST00000341060 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 NDUFA10O95299 355 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 DNM2P50570 870 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 CHP1Q99653 195 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
TDP2-201ENST00000341060 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 MAGEC2Q9UBF1 373 aaPredicted RBP16.32■□□□□ 0.2
TDP2-201ENST00000341060 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 EPN1Q9Y6I3 576 aaPredicted RBP16.32■□□□□ 0.2
TDP2-201ENST00000341060 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 MYH4Q9Y623 1939 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 GAKO14976 1311 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
TDP2-201ENST00000341060 BICDL2A1A5D9 508 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 SASH3O75995 380 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 PPP1R2P41236 205 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 MFSD14BQ5SR56 506 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 SOGA3Q5TF21 947 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 GGA1Q9UJY5 639 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 hCG_1984214I3L0E3 225 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 SRGNP10124 158 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 ADRA2BP18089 450 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 CCNE1P24864 410 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 ZNF713Q8N859 430 aaPredicted RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 TBCKQ8TEA7 893 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 P2RX5Q93086 422 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 PIGSQ96S52 555 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 ZSWIM4Q9H7M6 989 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
TDP2-201ENST00000341060 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
TDP2-201ENST00000341060 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 PDE4DQ08499 809 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 BRD3Q15059 726 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
TDP2-201ENST00000341060 ANKZF1Q9H8Y5 726 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms