RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KRT25Q7Z3Z0 450 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 OTUD6BQ8N6M0 293 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 BCAS4Q8TDM0 211 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 GPKOWQ92917 476 aaPredicted RBP eCLIP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 PSMB7Q99436 277 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 SELENOOQ9BVL4 669 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 RIC1Q4ADV7 1423 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 XDHP47989 1333 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 A0A087WUV0 522 aaPredicted RBP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 INPP5BP32019 993 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 TFAP4Q01664 338 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 UBE4AQ14139 1066 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 NONOQ15233 471 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 PFKFB3Q16875 520 aaPredicted RBP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 ADSSL1Q8N142 457 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 MMS19Q96T76 1030 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 CCDC87Q9NVE4 849 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 ZEB2O60315 1214 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 ERLIN2O94905 339 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 FGFR2P21802 821 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 CCT5P48643 541 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 PAK2Q13177 524 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
TRERF1-201ENST00000340840 CFAP221Q4G0U5 840 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 RNF187Q5TA31 235 aaPredicted RBP10.48□□□□□ -0.73
TRERF1-201ENST00000340840 VGLL2Q8N8G2 317 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 IFT81Q8WYA0 676 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 ZHX3Q9H4I2 956 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 VAT1LQ9HCJ6 419 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 TRIM10Q9UDY6 481 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 A0A087X0B3 334 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 LRRC10BA6NIK2 292 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 PBX1P40424 430 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 C2orf54Q08AI8 447 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 KCNB1Q14721 858 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 TRAPPC11Q7Z392 1133 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 ARFGAP2Q8N6H7 521 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 RASGRP4Q8TDF6 673 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 FANCGO15287 622 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 LDHCP07864 332 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 OR52Z1P0C646 297 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 CYP19A1P11511 503 aaPredicted RBP10.48□□□□□ -0.73
TRERF1-201ENST00000340840 RRAGAQ7L523 313 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 AK8Q96MA6 479 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 UBXN6Q9BZV1 441 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
TRERF1-201ENST00000340840 CCNT1O60563 726 aaKnown RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 GGCXP38435 758 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 EPHB4P54760 987 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 SEC23AQ15436 765 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 TRAPPC3LQ5T215 181 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 SUSD4Q5VX71 490 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 KRT79Q5XKE5 535 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 LRWD1Q9UFC0 647 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 ANAPC4Q9UJX5 808 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 TNNC1P63316 161 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 IFI16Q16666 785 aaKnown RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 SLC9C1Q4G0N8 1177 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 RRP36Q96EU6 259 aaKnown RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 LZTS2Q9BRK4 669 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 RABEP2Q9H5N1 569 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 HPCAL4Q9UM19 191 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 A0A0U1RQJ8 604 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 LRRIQ3A6PVS8 624 aaPredicted RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 SRBD1Q8N5C6 995 aaKnown RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 ATRIPQ8WXE1 791 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 HIBADHP31937 336 aaKnown RBP10.47□□□□□ -0.73
TRERF1-201ENST00000340840 ARHGAP25P42331 645 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 TROAPQ12815 778 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 PKN1Q16512 942 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 EMBQ6PCB8 327 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 HINFPQ9BQA5 517 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 SH3GLB2Q9NR46 395 aa10.47□□□□□ -0.73
TRERF1-201ENST00000340840 TFRCP02786 760 aaKnown RBP10.46□□□□□ -0.73
TRERF1-201ENST00000340840 SRGNP10124 158 aa10.46□□□□□ -0.73
TRERF1-201ENST00000340840 NOP2P46087 812 aaKnown RBP10.46□□□□□ -0.73
TRERF1-201ENST00000340840 IRX3P78415 501 aaPredicted RBP10.46□□□□□ -0.73
TRERF1-201ENST00000340840 DNAJC7Q99615 494 aa10.46□□□□□ -0.73
TRERF1-201ENST00000340840 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
TRERF1-201ENST00000340840 ANKRD65E5RJM6 399 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 GSTO1P78417 241 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 APBA1Q02410 837 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 EARS2Q5JPH6 523 aaKnown RBP10.46□□□□□ -0.74
TRERF1-201ENST00000340840 PDXDC2PQ6P474 469 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 CCNI2Q6ZMN8 369 aaPredicted RBP10.46□□□□□ -0.74
TRERF1-201ENST00000340840 PDS5AQ29RF7 1337 aaKnown RBP10.46□□□□□ -0.74
TRERF1-201ENST00000340840 CNTNAP5Q8WYK1 1306 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 MST1RQ04912 1400 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 TXKP42681 527 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 LIG3P49916 1009 aa10.46□□□□□ -0.74
TRERF1-201ENST00000340840 PAPD7Q5XG87 772 aaKnown RBP10.46□□□□□ -0.74
TRERF1-201ENST00000340840 ALS2CLQ60I27 953 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms