RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ZNF536O15090 1300 aa16.97■□□□□ 0.31
CSRP1-201ENST00000340006 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
CSRP1-201ENST00000340006 GNA11P29992 359 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 MAP2K2P36507 400 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 OAZ1P54368 228 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 ANKRD13CQ8N6S4 541 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 GTF3C2Q8WUA4 911 aaPredicted RBP16.96■□□□□ 0.31
CSRP1-201ENST00000340006 TRERF1Q96PN7 1200 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 PSTPIP2Q9H939 334 aa16.96■□□□□ 0.31
CSRP1-201ENST00000340006 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.31
CSRP1-201ENST00000340006 CALML3P27482 149 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 GCLCP48506 637 aaPredicted RBP16.95■□□□□ 0.3
CSRP1-201ENST00000340006 TYW1BQ6NUM6 668 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 CCAR1Q8IX12 1150 aaKnown RBP16.95■□□□□ 0.3
CSRP1-201ENST00000340006 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 ZFYVE28Q9HCC9 887 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 BRMS1Q9HCU9 246 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 ZNF214Q9UL59 606 aaPredicted RBP16.95■□□□□ 0.3
CSRP1-201ENST00000340006 ABCB11O95342 1321 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 ALDH1A1P00352 501 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 MMP1P03956 469 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
CSRP1-201ENST00000340006 Q3C1V9 767 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 POTEEQ6S8J3 1075 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 REPS2Q8NFH8 660 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 GPRC5AQ8NFJ5 357 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 SPATC1LQ9H0A9 340 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
CSRP1-201ENST00000340006 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 ADCY7P51828 1080 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 NCAPG2Q86XI2 1143 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 CUL5Q93034 780 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
CSRP1-201ENST00000340006 CFBP00751 764 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 KRT2P35908 639 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 ERVK-24P63145 666 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 WDR78Q5VTH9 848 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 BICD2Q8TD16 824 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 PCDHA4Q9UN74 947 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 BTBD18B2RXH4 712 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 DIS3L2Q8IYB7 885 aaKnown RBP16.93■□□□□ 0.3
CSRP1-201ENST00000340006 BLIDQ8IZY5 108 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 FAM177A1Q8N128 213 aaPredicted RBP16.93■□□□□ 0.3
CSRP1-201ENST00000340006 GLT8D2Q9H1C3 349 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
CSRP1-201ENST00000340006 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
CSRP1-201ENST00000340006 CNMDO75829 334 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 ZSCAN22P10073 491 aaPredicted RBP16.92■□□□□ 0.3
CSRP1-201ENST00000340006 CCNA1P78396 465 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 TKFCQ3LXA3 575 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 MCF2L2Q86YR7 1114 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 TNPO1Q92973 898 aaKnown RBP16.92■□□□□ 0.3
CSRP1-201ENST00000340006 MOV10L1Q9BXT6 1211 aaKnown RBP16.92■□□□□ 0.3
CSRP1-201ENST00000340006 RIC8AQ9NPQ8 531 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 RNF146Q9NTX7 359 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 ZDHHC9Q9Y397 364 aa16.92■□□□□ 0.3
CSRP1-201ENST00000340006 CA12O43570 354 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 TLR2O60603 784 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 SLC25A27O95847 323 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 CRHR2Q13324 411 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 RGS22Q8NE09 1264 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 OXER1Q8TDS5 423 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 GCOM1H8Y6P7 765 aaPredicted RBP16.91■□□□□ 0.3
CSRP1-201ENST00000340006 TRPA1O75762 1119 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 BRD1O95696 1058 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 POLR2MP0CAP2 368 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 ERCC3P19447 782 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 NSMFQ6X4W1 530 aa16.91■□□□□ 0.3
CSRP1-201ENST00000340006 ESYT2A0FGR8 921 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 NFIBO00712 420 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-201ENST00000340006 HOXA13P31271 388 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-201ENST00000340006 NR5A1Q13285 461 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 UBE2SQ16763 222 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-201ENST00000340006 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
CSRP1-201ENST00000340006 REXO1Q8N1G1 1221 aaKnown RBP16.9■□□□□ 0.3
CSRP1-201ENST00000340006 ANKRD35Q8N283 1001 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 CHST13Q8NET6 341 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 FBXO40Q9UH90 709 aa16.9■□□□□ 0.3
CSRP1-201ENST00000340006 TBC1D8O95759 1140 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 FCHSD1Q86WN1 690 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.3
CSRP1-201ENST00000340006 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms