RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 SPATS2Q86XZ4 545 aaKnown RBP13.79□□□□□ -0.2
RIOK3-201ENST00000339486 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
RIOK3-201ENST00000339486 SEC31BQ9NQW1 1179 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 MAP3K15Q6ZN16 1313 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 LDHCP07864 332 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 CCNE1P24864 410 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 CORO7P57737 925 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 POLR2FP61218 127 aaKnown RBP13.79□□□□□ -0.2
RIOK3-201ENST00000339486 FBXW10Q5XX13 1052 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 DAAM2Q86T65 1068 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 NLRP10Q86W26 655 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
RIOK3-201ENST00000339486 LSM14BQ9BX40 385 aaKnown RBP13.79□□□□□ -0.2
RIOK3-201ENST00000339486 NSRP1Q9H0G5 558 aaKnown RBP13.79□□□□□ -0.2
RIOK3-201ENST00000339486 KIF4AO95239 1232 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 SSR1P43307 286 aaKnown RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 TBX2Q13207 712 aaPredicted RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 HERC4Q5GLZ8 1057 aaPredicted RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 ALS2CLQ60I27 953 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 CACNA2D3Q8IZS8 1091 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 VIPAS39Q9H9C1 493 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 LIMA1Q9UHB6 759 aaKnown RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 GSG1L2A8MUP6 293 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 NR1D1P20393 614 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 LRRC1Q9BTT6 524 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 TFCP2L1Q9NZI6 479 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
RIOK3-201ENST00000339486 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 TMEM110-MUSTN1A8MSY1 372 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 DDAH1O94760 285 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 OR52Z1P0C646 297 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 BMP6P22004 513 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 DPYDQ12882 1025 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 KRT25Q7Z3Z0 450 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 PEX26Q7Z412 305 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 IQCDQ96DY2 449 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 ACSBG1Q96GR2 724 aa13.78□□□□□ -0.2
RIOK3-201ENST00000339486 TECPR2O15040 1411 aa13.77□□□□□ -0.2
RIOK3-201ENST00000339486 ADAMTS13Q76LX8 1427 aa13.77□□□□□ -0.2
RIOK3-201ENST00000339486 IRAK1P51617 712 aa13.77□□□□□ -0.2
RIOK3-201ENST00000339486 E2F5Q15329 346 aa13.77□□□□□ -0.2
RIOK3-201ENST00000339486 CCNI2Q6ZMN8 369 aaPredicted RBP13.77□□□□□ -0.2
RIOK3-201ENST00000339486 RSRC1Q96IZ7 334 aaKnown RBP13.77□□□□□ -0.2
RIOK3-201ENST00000339486 DPH5Q9H2P9 285 aa13.77□□□□□ -0.2
RIOK3-201ENST00000339486 PP2D1A8MPX8 630 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 APBA1Q02410 837 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 CCDC65Q8IXS2 484 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 SH2D3CQ8N5H7 860 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 UTP11Q9Y3A2 253 aaKnown RBP13.77□□□□□ -0.21
RIOK3-201ENST00000339486 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 SMCO2A6NFE2 343 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 CETN3O15182 167 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 NCK2O43639 380 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
RIOK3-201ENST00000339486 PREX1Q8TCU6 1659 aa13.77□□□□□ -0.21
RIOK3-201ENST00000339486 MAP2K7O14733 419 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 TBCAO75347 108 aaKnown RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 LRRC41Q15345 812 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 HLFQ16534 295 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 ZSCAN29Q8IWY8 852 aaPredicted RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 ENAHQ8N8S7 591 aaPredicted RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 RASAL2Q9UJF2 1139 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 PPP1R3GB7ZBB8 358 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 PLCG1P19174 1290 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 ALX1Q15699 326 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 CALCRLQ16602 461 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 PAIP2Q9BPZ3 127 aaKnown RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 RAB21Q9UL25 225 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 TARSL2A2RTX5 802 aaKnown RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 KRIT1O00522 736 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 GKAP1Q5VSY0 366 aaPredicted RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 TRMT1LQ7Z2T5 733 aaKnown RBP13.76□□□□□ -0.21
RIOK3-201ENST00000339486 ITIH6Q6UXX5 1313 aa13.76□□□□□ -0.21
RIOK3-201ENST00000339486 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
RIOK3-201ENST00000339486 VWA3BQ502W6 1294 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 SWAP70Q9UH65 585 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 ZBTB1Q9Y2K1 713 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 CHRNDQ07001 517 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 ADAT2Q7Z6V5 191 aaKnown RBP13.75□□□□□ -0.21
RIOK3-201ENST00000339486 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
RIOK3-201ENST00000339486 REXO1Q8N1G1 1221 aaKnown RBP13.75□□□□□ -0.21
RIOK3-201ENST00000339486 OSBPL9Q96SU4 736 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms