RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 GNPTABQ3T906 1256 aa14□□□□□ -0.17
DFFB-202ENST00000339350 FAM182BQ5T319 152 aa14□□□□□ -0.17
DFFB-202ENST00000339350 CWF19L1Q69YN2 538 aaKnown RBP14□□□□□ -0.17
DFFB-202ENST00000339350 TMEM87BQ96K49 555 aa14□□□□□ -0.17
DFFB-202ENST00000339350 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
DFFB-202ENST00000339350 SMNDC1O75940 238 aaKnown RBP eCLIP14□□□□□ -0.17
DFFB-202ENST00000339350 UPP2O95045 317 aa14□□□□□ -0.17
DFFB-202ENST00000339350 CCDC15Q0P6D6 951 aa14□□□□□ -0.17
DFFB-202ENST00000339350 MORC3Q14149 939 aa14□□□□□ -0.17
DFFB-202ENST00000339350 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
DFFB-202ENST00000339350 MFSD6Q6ZSS7 791 aa14□□□□□ -0.17
DFFB-202ENST00000339350 LCORLQ8N3X6 602 aa14□□□□□ -0.17
DFFB-202ENST00000339350 KCNV2Q8TDN2 545 aa14□□□□□ -0.17
DFFB-202ENST00000339350 TCP11Q8WWU5 503 aa14□□□□□ -0.17
DFFB-202ENST00000339350 CDC5LQ99459 802 aaKnown RBP14□□□□□ -0.17
DFFB-202ENST00000339350 RGL1Q9NZL6 768 aa14□□□□□ -0.17
DFFB-202ENST00000339350 SPEF2Q9C093 1822 aa14□□□□□ -0.17
DFFB-202ENST00000339350 FESP07332 822 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CSF1RP07333 972 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 PTPREP23469 700 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 SLC8A1P32418 973 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 PAPOLAP51003 745 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 WTAPQ15007 396 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 NKX1-1Q15270 411 aaPredicted RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 SPTY2D1Q68D10 685 aaPredicted RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 TRIM22Q8IYM9 498 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 STAMBPL1Q96FJ0 436 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 MMTAG2Q9BU76 263 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 MAPK8IP1Q9UQF2 711 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 KCPQ6ZWJ8 1503 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 AKR1B15C9JRZ8 316 aaPredicted RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 AHCYL1O43865 530 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 PDE8BO95263 885 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 MYL1P05976 194 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CASP14P31944 242 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 ZBED6P86452 979 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 KIAA0825Q8IV33 1275 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CCDC50Q8IVM0 306 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 GSPT2Q8IYD1 628 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 RASSF8Q8NHQ8 419 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 SDR42E1Q8WUS8 393 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 SHISA4Q96DD7 197 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 SPAG5Q96R06 1193 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 SLC4A4Q9Y6R1 1079 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 FAM237AA0A1B0GTK4 181 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CTAGE15A4D2H0 777 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 ACTN4O43707 911 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 STARD3NLO95772 234 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CTAGE8P0CG41 777 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 MAGEA10P43363 369 aaPredicted RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 RASGRF1Q13972 1273 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 MICALCLQ6ZW33 695 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CTAGE6Q86UF2 777 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CTAGE4Q8IX94 777 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
DFFB-202ENST00000339350 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
DFFB-202ENST00000339350 CCDC175P0C221 793 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 CTSWP56202 376 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 NR1I3Q14994 352 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 UBE3CQ15386 1083 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 DBN1Q16643 649 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 PPFIBP1Q86W92 1011 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 FAM81AQ8TBF8 368 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
DFFB-202ENST00000339350 MAGEC3Q8TD91 643 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 COG1Q8WTW3 980 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 PAPOLBQ9NRJ5 636 aaKnown RBP13.98□□□□□ -0.17
DFFB-202ENST00000339350 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
DFFB-202ENST00000339350 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 KCNQ2O43526 872 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 BUB1BO60566 1050 aaPredicted RBP13.98□□□□□ -0.17
DFFB-202ENST00000339350 GNAT1P11488 350 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 IFNAR1P17181 557 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 RASA3Q14644 834 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 PLCB4Q15147 1175 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 TTF1Q15361 905 aaPredicted RBP13.98□□□□□ -0.17
DFFB-202ENST00000339350 ZNF174Q15697 407 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 ARHGAP22Q7Z5H3 698 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 SGMS1Q86VZ5 419 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
DFFB-202ENST00000339350 CYP2D7A0A087X1C5 515 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 ZMYND10O75800 440 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
DFFB-202ENST00000339350 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 TFR2Q9UP52 801 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 PKD1L3Q7Z443 1732 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 SRCAPQ6ZRS2 3230 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
DFFB-202ENST00000339350 EIF4E1BA6NMX2 242 aaKnown RBP13.97□□□□□ -0.17
DFFB-202ENST00000339350 BCAMP50895 628 aa13.97□□□□□ -0.17
DFFB-202ENST00000339350 FXR1P51114 621 aaKnown RBP eCLIP13.97□□□□□ -0.17
DFFB-202ENST00000339350 DPYDQ12882 1025 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms