RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PRPF3O43395 683 aaKnown RBP15.72■□□□□ 0.11
PCDH8-201ENST00000338862 ARHGAP25P42331 645 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 IFFO1Q0D2I5 559 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 PICALMQ13492 652 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 MUM1L1Q5H9M0 696 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 FAM169AQ9Y6X4 670 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 ZSCAN5CA6NGD5 496 aaPredicted RBP15.72■□□□□ 0.11
PCDH8-201ENST00000338862 MAGEA9P43362 315 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 STK4Q13043 487 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 UBLCP1Q8WVY7 318 aaPredicted RBP15.72■□□□□ 0.11
PCDH8-201ENST00000338862 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 SPAG5Q96R06 1193 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 CACNA1FO60840 1977 aa15.72■□□□□ 0.11
PCDH8-201ENST00000338862 PDE2AO00408 941 aaPredicted RBP15.71■□□□□ 0.11
PCDH8-201ENST00000338862 TUBB2AQ13885 445 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 PKN1Q16512 942 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 CEP85LQ5SZL2 805 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 ANKRD40Q6AI12 368 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 TMTC3Q6ZXV5 915 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 FAM114A1Q8IWE2 563 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 MARCH10Q8NA82 808 aaPredicted RBP15.71■□□□□ 0.11
PCDH8-201ENST00000338862 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 PHF20Q9BVI0 1012 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 STK36Q9NRP7 1315 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 FRMPD2Q68DX3 1309 aaPredicted RBP15.71■□□□□ 0.11
PCDH8-201ENST00000338862 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 HERVK_113P62684 666 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 DIXDC1Q155Q3 683 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 CDKAL1Q5VV42 579 aa15.71■□□□□ 0.11
PCDH8-201ENST00000338862 SLIT1O75093 1534 aa15.71■□□□□ 0.1
PCDH8-201ENST00000338862 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 TCRBV5S4A2TA0A5A2 114 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 CEP104O60308 925 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 GUCY1A3Q02108 690 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 CAPN6Q9Y6Q1 641 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 POLR2FP61218 127 aaKnown RBP15.7■□□□□ 0.1
PCDH8-201ENST00000338862 AMPD3Q01432 767 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 APBA1Q02410 837 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 IFT88Q13099 833 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 TXNRD1Q16881 649 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 ICE2Q659A1 982 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 TULP2O00295 520 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 HEXIM1O94992 359 aaKnown RBP15.7■□□□□ 0.1
PCDH8-201ENST00000338862 TUBBP07437 444 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 KIF11P52732 1056 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 ATP2C1P98194 919 aaPredicted RBP15.7■□□□□ 0.1
PCDH8-201ENST00000338862 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
PCDH8-201ENST00000338862 MSANTD4Q8NCY6 345 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 P2RX5Q93086 422 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 TSG101Q99816 390 aa15.7■□□□□ 0.1
PCDH8-201ENST00000338862 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
PCDH8-201ENST00000338862 LOC102724159A0A0B4J2E5 919 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 PWP2Q15269 919 aaKnown RBP15.69■□□□□ 0.1
PCDH8-201ENST00000338862 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 ARL8AQ96BM9 186 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 PCDHA13Q9Y5I0 950 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 RGPD1P0DJD0 1748 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 NNTQ13423 1086 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 LIMA1Q9UHB6 759 aaKnown RBP15.69■□□□□ 0.1
PCDH8-201ENST00000338862 REXO2Q9Y3B8 237 aaKnown RBP15.69■□□□□ 0.1
PCDH8-201ENST00000338862 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 SEC24CP53992 1094 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 TADA2BQ86TJ2 420 aa15.69■□□□□ 0.1
PCDH8-201ENST00000338862 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 KCNK3O14649 394 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 KLRK1P26718 216 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 TRIM58Q8NG06 486 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 SNX29Q8TEQ0 813 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 CCDC114Q96M63 670 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 MTRQ99707 1265 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 PYM1Q9BRP8 204 aaKnown RBP15.68■□□□□ 0.1
PCDH8-201ENST00000338862 LRRC53A6NM62 1247 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 KLRF2D3W0D1 207 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 TUBB4BP68371 445 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 CCNI2Q6ZMN8 369 aaPredicted RBP15.68■□□□□ 0.1
PCDH8-201ENST00000338862 NOX5Q96PH1 765 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 AP1M1Q9BXS5 423 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 DPH5Q9H2P9 285 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 MYO1AQ9UBC5 1043 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 ADAMTS1Q9UHI8 967 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 IRAK1P51617 712 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 KIAA0753Q2KHM9 967 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 FBXL16Q8N461 479 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 SPATA4Q8NEY3 305 aa15.68■□□□□ 0.1
PCDH8-201ENST00000338862 HNRNPLLQ8WVV9 542 aaKnown RBP15.68■□□□□ 0.1
PCDH8-201ENST00000338862 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
PCDH8-201ENST00000338862 FAM205AQ6ZU69 1335 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 POTEMA6NI47 508 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 ZBED6P86452 979 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 MECOMQ03112 1051 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 TROAPQ12815 778 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms