RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 MSL3Q8N5Y2 521 aaKnown RBP13.62□□□□□ -0.23
TREM2-201ENST00000338469 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
TREM2-201ENST00000338469 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
TREM2-201ENST00000338469 RNF146Q9NTX7 359 aa13.62□□□□□ -0.23
TREM2-201ENST00000338469 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
TREM2-201ENST00000338469 ALAS1P13196 640 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 ACLYP53396 1101 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 SHHQ15465 462 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 KCNA10Q16322 511 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
TREM2-201ENST00000338469 CCDC144BQ3MJ40 725 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 FAM160B2Q86V87 743 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 UPF2Q9HAU5 1272 aaKnown RBP13.61□□□□□ -0.23
TREM2-201ENST00000338469 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
TREM2-201ENST00000338469 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 CNPY2Q9Y2B0 182 aa13.61□□□□□ -0.23
TREM2-201ENST00000338469 FRMPD2Q68DX3 1309 aaPredicted RBP13.61□□□□□ -0.23
TREM2-201ENST00000338469 ZNF213O14771 459 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 BTNL9Q6UXG8 535 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 RNF180Q86T96 592 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
TREM2-201ENST00000338469 RANBP17Q9H2T7 1088 aaKnown RBP13.6□□□□□ -0.23
TREM2-201ENST00000338469 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 GPCPD1Q9NPB8 672 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 TOMM22Q9NS69 142 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 MTMR10Q9NXD2 777 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
TREM2-201ENST00000338469 NEDD4P46934 1319 aa13.6□□□□□ -0.23
TREM2-201ENST00000338469 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 DUSP11O75319 330 aaKnown RBP13.59□□□□□ -0.23
TREM2-201ENST00000338469 FAAP100Q0VG06 881 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
TREM2-201ENST00000338469 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 RNF20Q5VTR2 975 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 DCAF4Q8WV16 495 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 LBHD1Q9BQE6 289 aaPredicted RBP13.59□□□□□ -0.23
TREM2-201ENST00000338469 ZKSCAN3Q9BRR0 538 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 UPF3AQ9H1J1 476 aaKnown RBP13.59□□□□□ -0.23
TREM2-201ENST00000338469 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 CYP39A1Q9NYL5 469 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
TREM2-201ENST00000338469 NFIBO00712 420 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 SLC27A2O14975 620 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
TREM2-201ENST00000338469 FDX1P10109 184 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 PDHBP11177 359 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
TREM2-201ENST00000338469 HSPA4P34932 840 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 CDK7P50613 346 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 GJA9P57773 515 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 BEX3Q00994 111 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 GPR153Q6NV75 609 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 TAPT1Q6NXT6 567 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 CLEC4DQ8WXI8 215 aa13.58□□□□□ -0.24
TREM2-201ENST00000338469 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
TREM2-201ENST00000338469 LRRC37A2A6NM11 1700 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 KIAA0355O15063 1070 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 ICAM1P05362 532 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 ASGR1P07306 291 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 CYP21A2P08686 494 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 C6orf222P0C671 652 aaPredicted RBP13.57□□□□□ -0.24
TREM2-201ENST00000338469 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 SMPD1P17405 629 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 CST5P28325 142 aaPredicted RBP13.57□□□□□ -0.24
TREM2-201ENST00000338469 BAATQ14032 418 aaPredicted RBP13.57□□□□□ -0.24
TREM2-201ENST00000338469 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 EEPD1Q7L9B9 569 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 ANKRD33Q7Z3H0 272 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
TREM2-201ENST00000338469 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
TREM2-201ENST00000338469 CDH23Q9H251 3354 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 CLTBP09497 229 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 NKX3-2P78367 333 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 ZNF543Q08ER8 600 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
TREM2-201ENST00000338469 TBC1D5Q92609 795 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 FAM161BQ96MY7 647 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 COL25A1Q9BXS0 654 aaPredicted RBP13.56□□□□□ -0.24
TREM2-201ENST00000338469 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 RNF41Q9H4P4 317 aaPredicted RBP13.56□□□□□ -0.24
TREM2-201ENST00000338469 STARD7Q9NQZ5 370 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 PRKAG2Q9UGJ0 569 aa13.56□□□□□ -0.24
TREM2-201ENST00000338469 EYSQ5T1H1 3165 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms