RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ADGRE1Q14246 886 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 FSCN1Q16658 493 aaKnown RBP13.67□□□□□ -0.22
CSMD2-202ENST00000338325 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 IFNL3Q8IZI9 196 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 GMCL1Q96IK5 515 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 AGBL1Q96MI9 1066 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 AP5M1Q9H0R1 490 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 NKX2-4Q9H2Z4 354 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 ZNF536O15090 1300 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 UMODL1Q5DID0 1318 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
CSMD2-202ENST00000338325 ZEB2O60315 1214 aa13.66□□□□□ -0.22
CSMD2-202ENST00000338325 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
CSMD2-202ENST00000338325 TRERF1Q96PN7 1200 aa13.66□□□□□ -0.22
CSMD2-202ENST00000338325 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
CSMD2-202ENST00000338325 SLC28A3Q9HAS3 691 aa13.66□□□□□ -0.22
CSMD2-202ENST00000338325 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
CSMD2-202ENST00000338325 PLA2G6O60733 806 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
CSMD2-202ENST00000338325 ALAS1P13196 640 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 SMPD1P17405 629 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 COL9A1P20849 921 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 IGFBP4P22692 258 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 SLC1A4P43007 532 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 MRPS5P82675 430 aaKnown RBP13.65□□□□□ -0.22
CSMD2-202ENST00000338325 TFAP4Q01664 338 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
CSMD2-202ENST00000338325 LRRFIP1Q32MZ4 808 aaKnown RBP13.65□□□□□ -0.22
CSMD2-202ENST00000338325 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 OTOP2Q7RTS6 562 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 MIER1Q8N108 512 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 NOC4LQ9BVI4 516 aaKnown RBP13.65□□□□□ -0.22
CSMD2-202ENST00000338325 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
CSMD2-202ENST00000338325 DYNC1LI2O43237 492 aaPredicted RBP13.64□□□□□ -0.23
CSMD2-202ENST00000338325 B4GALT4O60513 344 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 CCL23P55773 120 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 PPARAQ07869 468 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 FBXO16Q8IX29 292 aaPredicted RBP13.64□□□□□ -0.23
CSMD2-202ENST00000338325 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 TANC1Q9C0D5 1861 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 NAPBQ9H115 298 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 TRPV6Q9H1D0 765 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 Q9Y3F1 56 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 PTGS1P23219 599 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 MCCP23508 829 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 TAPT1Q6NXT6 567 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
CSMD2-202ENST00000338325 IL27Q8NEV9 243 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
CSMD2-202ENST00000338325 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
CSMD2-202ENST00000338325 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
CSMD2-202ENST00000338325 PSMC6P62333 389 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 C20orf194Q5TEA3 1177 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 RCSD1Q6JBY9 416 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 CHMP4CQ96CF2 233 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 UHRF1Q96T88 793 aaPredicted RBP13.63□□□□□ -0.23
CSMD2-202ENST00000338325 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 PRR12Q9ULL5 1215 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
CSMD2-202ENST00000338325 REV3LO60673 3130 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 TCF20Q9UGU0 1960 aaKnown RBP13.62□□□□□ -0.23
CSMD2-202ENST00000338325 RABGGTBP53611 331 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 SNAP25P60880 206 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 TMEM63BQ5T3F8 832 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 NSMFQ6X4W1 530 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 MORC4Q8TE76 937 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 ALDH8A1Q9H2A2 487 aaPredicted RBP13.62□□□□□ -0.23
CSMD2-202ENST00000338325 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
CSMD2-202ENST00000338325 CCPG1Q9ULG6 757 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
CSMD2-202ENST00000338325 TTC41PQ6P2S7 1318 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 TSPY2A6NKD2 308 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 ZBBXA8MT70 800 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 PFKMP08237 780 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 KIAA1211Q6ZU35 1233 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 RASGRP2Q7LDG7 609 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 SCLYQ96I15 445 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
CSMD2-202ENST00000338325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSMD2-202ENST00000338325 ERC2O15083 957 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 ICAM1P05362 532 aa13.6□□□□□ -0.23
CSMD2-202ENST00000338325 MYOGP15173 224 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms