RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FCER1AP12319 257 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 PTPREP23469 700 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 KCTD2Q14681 263 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 RGS22Q8NE09 1264 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 SOCS4Q8WXH5 440 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 RNF146Q9NTX7 359 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 PCDHA1Q9Y5I3 950 aa17.78■□□□□ 0.44
SEC13-201ENST00000337354 CNTNAP5Q8WYK1 1306 aa17.77■□□□□ 0.44
SEC13-201ENST00000337354 SLC15A5A6NIM6 579 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 hCG_1984214I3L0E3 225 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 CTGFP29279 349 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 SSRP1Q08945 709 aaKnown RBP17.77■□□□□ 0.43
SEC13-201ENST00000337354 MCF2L2Q86YR7 1114 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 ZNF713Q8N859 430 aaPredicted RBP17.77■□□□□ 0.43
SEC13-201ENST00000337354 NUDT12Q9BQG2 462 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 ARHGAP39Q9C0H5 1083 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 GJD2Q9UKL4 321 aa17.77■□□□□ 0.43
SEC13-201ENST00000337354 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
SEC13-201ENST00000337354 LARGE1O95461 756 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 GRB14Q14449 540 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 USH1GQ495M9 461 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 OTOP1Q7RTM1 612 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 NECAB1Q8N987 351 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 PIBF1Q8WXW3 757 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 MMP19Q99542 508 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
SEC13-201ENST00000337354 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 SLC5A4Q9NY91 659 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 MAP3K20Q9NYL2 800 aaKnown RBP17.76■□□□□ 0.43
SEC13-201ENST00000337354 SRRDQ9UH36 339 aa17.76■□□□□ 0.43
SEC13-201ENST00000337354 RLFQ13129 1914 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 PKN2Q16513 984 aaKnown RBP17.75■□□□□ 0.43
SEC13-201ENST00000337354 PFKFB3Q16875 520 aaPredicted RBP17.75■□□□□ 0.43
SEC13-201ENST00000337354 MORN1Q5T089 497 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 TEX2Q8IWB9 1127 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 ANKRD35Q8N283 1001 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 CLEC4DQ8WXI8 215 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 PHKBQ93100 1093 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 SNX21Q969T3 373 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 TMX3Q96JJ7 454 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
SEC13-201ENST00000337354 CD2BP2O95400 341 aaKnown RBP17.74■□□□□ 0.43
SEC13-201ENST00000337354 DEXIO95424 95 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 XRCC5P13010 732 aaKnown RBP17.74■□□□□ 0.43
SEC13-201ENST00000337354 SCG2P13521 617 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 MAP2K5Q13163 448 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 IRF5Q13568 498 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
SEC13-201ENST00000337354 USP6NLQ92738 828 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 PFASO15067 1338 aa17.74■□□□□ 0.43
SEC13-201ENST00000337354 PARP14Q460N5 1801 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 A0A0G2JMZ2 1700 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 STK36Q9NRP7 1315 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 hCG_1642624A0A1W2PR95 340 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 CCDC85CA6NKD9 419 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 HOXC6P09630 235 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 ADORA2AP29274 412 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 RGS2P41220 211 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 FLT3LGP49771 235 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 CAP1Q01518 475 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 GHRHRQ02643 423 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 PKN1Q16512 942 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 PPP1R18Q6NYC8 613 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 DPP9Q86TI2 863 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 FAM177A1Q8N128 213 aaPredicted RBP17.73■□□□□ 0.43
SEC13-201ENST00000337354 CCDC12Q8WUD4 166 aaPredicted RBP17.73■□□□□ 0.43
SEC13-201ENST00000337354 WASF1Q92558 559 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 A1CFQ9NQ94 594 aaKnown RBP17.73■□□□□ 0.43
SEC13-201ENST00000337354 BARHL2Q9NY43 387 aa17.73■□□□□ 0.43
SEC13-201ENST00000337354 DIS3Q9Y2L1 958 aaKnown RBP17.73■□□□□ 0.43
SEC13-201ENST00000337354 NFIBO00712 420 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 PRKCZQ05513 592 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 RNF207Q6ZRF8 634 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 GLT8D2Q9H1C3 349 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
SEC13-201ENST00000337354 DNAJC25-GNG10A0A024R161 153 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
SEC13-201ENST00000337354 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 NSMFQ6X4W1 530 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 TRMT44Q8IYL2 757 aaKnown RBP17.71■□□□□ 0.43
SEC13-201ENST00000337354 NSUN7Q8NE18 718 aaKnown RBP17.71■□□□□ 0.43
SEC13-201ENST00000337354 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 GABRQQ9UN88 632 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
SEC13-201ENST00000337354 POTEB2H3BUK9 544 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 XBP1P17861 261 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 MRPL12P52815 198 aaKnown RBP17.7■□□□□ 0.42
SEC13-201ENST00000337354 NAPAP54920 295 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
SEC13-201ENST00000337354 ST3GAL1Q11201 340 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 BAATQ14032 418 aaPredicted RBP17.7■□□□□ 0.42
SEC13-201ENST00000337354 ZNF792Q3KQV3 632 aa17.7■□□□□ 0.42
SEC13-201ENST00000337354 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms