RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 HOMER2Q9NSB8 354 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 GPRC5AQ8NFJ5 357 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 CLEC4DQ8WXI8 215 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 IPO9Q96P70 1041 aaKnown RBP17.43■□□□□ 0.38
CMC1-201ENST00000334841 SH3GLB2Q9NR46 395 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 RNF146Q9NTX7 359 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 PNMA2Q9UL42 364 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
CMC1-201ENST00000334841 NFIBO00712 420 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 TRPA1O75762 1119 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 TBC1D8O95759 1140 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 TRAF1Q13077 416 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 NPY5RQ15761 445 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 TKFCQ3LXA3 575 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 CCDC148Q8NFR7 591 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 C8orf76Q96K31 380 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 TRERF1Q96PN7 1200 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 PHF20Q9BVI0 1012 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 PORCNQ9H237 461 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 KCNJ14Q9UNX9 436 aa17.42■□□□□ 0.38
CMC1-201ENST00000334841 ESYT2A0FGR8 921 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 ADAMTS3O15072 1205 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 ERCC3P19447 782 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 KRT40Q6A162 431 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 NCAPG2Q86XI2 1143 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 SHCBP1Q8NEM2 672 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
CMC1-201ENST00000334841 ZMYND12Q9H0C1 365 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 SAGE1Q9NXZ1 904 aa17.41■□□□□ 0.38
CMC1-201ENST00000334841 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
CMC1-201ENST00000334841 MRPL11Q9Y3B7 192 aaKnown RBP17.41■□□□□ 0.38
CMC1-201ENST00000334841 SLC25A27O95847 323 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 XBP1P17861 261 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 COPB2P35606 906 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 DDIT3P35638 169 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 CCNA1P78396 465 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 LARP1BQ659C4 914 aaKnown RBP17.4■□□□□ 0.38
CMC1-201ENST00000334841 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
CMC1-201ENST00000334841 CHST13Q8NET6 341 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 FBXO18Q8NFZ0 1043 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 ACAD9Q9H845 621 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 EFCC1Q9HA90 598 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
CMC1-201ENST00000334841 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 ZSWIM8A7E2V4 1837 aa17.4■□□□□ 0.38
CMC1-201ENST00000334841 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 MMP1P03956 469 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 PDCP20941 246 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 SYT1P21579 422 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 ADCY7P51828 1080 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 NLRP5P59047 1200 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
CMC1-201ENST00000334841 TRIM29Q14134 588 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 DAGLBQ8NCG7 672 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.37
CMC1-201ENST00000334841 PLXNB2O15031 1838 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 ZNF236Q9UL36 1845 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 GHRHRQ02643 423 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 PKP1Q13835 747 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 UBE2SQ16763 222 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 SLC30A10Q6XR72 485 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.38■□□□□ 0.37
CMC1-201ENST00000334841 OXER1Q8TDS5 423 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 TBC1D5Q92609 795 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 CUL5Q93034 780 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 MROH8Q9H579 483 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 PSTPIP2Q9H939 334 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 C6orf50Q9HD87 102 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
CMC1-201ENST00000334841 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
CMC1-201ENST00000334841 LCTP09848 1927 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 VPS37CA5D8V6 355 aaPredicted RBP17.37■□□□□ 0.37
CMC1-201ENST00000334841 H3BQV1 296 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 MEIS2O14770 477 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 CFBP00751 764 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 CALML3P27482 149 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 HSD17B4P51659 736 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 WDR78Q5VTH9 848 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 USP17L6PQ6QN14 398 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 NSMFQ6X4W1 530 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 RGS22Q8NE09 1264 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 WBP1LQ9NX94 342 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 MTMR6Q9Y217 621 aa17.37■□□□□ 0.37
CMC1-201ENST00000334841 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 M0R2N6 131 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 STX6O43752 255 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 ECM2O94769 699 aaPredicted RBP17.36■□□□□ 0.37
CMC1-201ENST00000334841 CTGFP29279 349 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 GNA11P29992 359 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 MAPK4P31152 587 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 HOXA13P31271 388 aaPredicted RBP17.36■□□□□ 0.37
CMC1-201ENST00000334841 KRT2P35908 639 aa17.36■□□□□ 0.37
CMC1-201ENST00000334841 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
CMC1-201ENST00000334841 GALNT17Q6IS24 598 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms