RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 NSMFQ6X4W1 530 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 ANKRD20A12PQ8NF67 263 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 SRRTQ9BXP5 876 aaKnown RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 MAGEC2Q9UBF1 373 aaPredicted RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 PCDHA12Q9UN75 941 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 HPSEQ9Y251 543 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 CICQ96RK0 1608 aaPredicted RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 RPN1P04843 607 aaKnown RBP10.15□□□□□ -0.78
COPB2-201ENST00000333188 MTIF2P46199 727 aaKnown RBP10.15□□□□□ -0.78
COPB2-201ENST00000333188 ARID5AQ03989 594 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 RASA3Q14644 834 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 KANK3Q6NY19 840 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 SYT10Q6XYQ8 523 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 PLA2G4DQ86XP0 818 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.78
COPB2-201ENST00000333188 ZNF341Q9BYN7 854 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 TAOK3Q9H2K8 898 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 KIAA1024Q9UPX6 916 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 NPHP3-ACAD11A0A0J9YXS1 232 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 ALAS1P13196 640 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 UBXN1Q04323 297 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 RRP1BQ14684 758 aaKnown RBP10.15□□□□□ -0.78
COPB2-201ENST00000333188 KIAA1524Q8TCG1 905 aa10.15□□□□□ -0.78
COPB2-201ENST00000333188 A0A1W2PRG0 241 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 BMP15O95972 392 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 BMP3P12645 472 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 CHMP4BP1P59074 171 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 PABPC4Q13310 644 aaKnown RBP eCLIP10.15□□□□□ -0.798e-11■■□□□ 14.1
COPB2-201ENST00000333188 HHIPL2Q6UWX4 724 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 FBXO11Q86XK2 927 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 ZNF70Q9UC06 446 aaPredicted RBP10.15□□□□□ -0.79
COPB2-201ENST00000333188 DNAI1Q9UI46 699 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 NWD2Q9ULI1 1742 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 IRS2Q9Y4H2 1338 aa10.15□□□□□ -0.79
COPB2-201ENST00000333188 CAVIN2O95810 425 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 MYCLP12524 364 aaPredicted RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 PRCPP42785 496 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 PDE4CQ08493 712 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 RBM43Q6ZSC3 357 aaKnown RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 IGSF22Q8N9C0 903 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 ZDHHC15Q96MV8 337 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 GAKO14976 1311 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 C4BP0C0L5 1744 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 COL22A1Q8NFW1 1626 aaPredicted RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 PNMA6FA0A0J9YX94 578 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 E9PMD0 336 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 ZBTB5O15062 677 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 PEX10O60683 326 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 PPP1R11O60927 126 aaPredicted RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 FGRP09769 529 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 STIM1Q13586 685 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 NCAPHQ15003 741 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 HS1BP3Q53T59 392 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 CIAPIN1Q6FI81 312 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 CRACR2AQ9BSW2 395 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 DISC1Q9NRI5 854 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 CBFA2T2O43439 604 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 URI1O94763 535 aaPredicted RBP10.14□□□□□ -0.79
COPB2-201ENST00000333188 DPYDQ12882 1025 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 TPH2Q8IWU9 490 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 CSGALNACT2Q8N6G5 542 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 MLKLQ8NB16 471 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 CCDC112Q8NEF3 446 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 PIGOQ8TEQ8 1089 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 SWAP70Q9UH65 585 aa10.14□□□□□ -0.79
COPB2-201ENST00000333188 FLOT1O75955 427 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 TPM1P09493 284 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 PAK1Q13153 545 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 MTF1Q14872 753 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 TCERG1LQ5VWI1 586 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 CEP135Q66GS9 1140 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 ARMCX5Q6P1M9 558 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 ZKSCAN4Q969J2 545 aaPredicted RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 LZTS2Q9BRK4 669 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 RNF216Q9NWF9 866 aaPredicted RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 POTECB2RU33 542 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 TSR1Q2NL82 804 aaKnown RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 HERC4Q5GLZ8 1057 aaPredicted RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 STYK1Q6J9G0 422 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 SV2BQ7L1I2 683 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 MICALL2Q8IY33 904 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 SUPT20HQ8NEM7 779 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 MTRQ99707 1265 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 MTA3Q9BTC8 594 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 DHX36Q9H2U1 1008 aaKnown RBP10.13□□□□□ -0.79
COPB2-201ENST00000333188 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
COPB2-201ENST00000333188 POTEFA5A3E0 1075 aa10.12□□□□□ -0.79
COPB2-201ENST00000333188 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
COPB2-201ENST00000333188 MKRN3Q13064 507 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms