RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 METAP2P50579 478 aaKnown RBP eCLIP23.78■■□□□ 1.4
MRPL40-201ENST00000333130 UBXN2AP68543 259 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 FBXO11Q86XK2 927 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 HOMER1Q86YM7 354 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 RRP36Q96EU6 259 aaKnown RBP23.78■■□□□ 1.4
MRPL40-201ENST00000333130 RIOX1Q9H6W3 641 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 QRICH1Q2TAL8 776 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 USH1GQ495M9 461 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.78■■□□□ 1.4
MRPL40-201ENST00000333130 RAB11FIP4Q86YS3 637 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 USP6NLQ92738 828 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 ZNF274Q96GC6 653 aaPredicted RBP23.78■■□□□ 1.4
MRPL40-201ENST00000333130 AMNQ9BXJ7 453 aa23.78■■□□□ 1.4
MRPL40-201ENST00000333130 ABCB11O95342 1321 aa23.77■■□□□ 1.4
MRPL40-201ENST00000333130 HTTP42858 3142 aa23.77■■□□□ 1.4
MRPL40-201ENST00000333130 HMGCRP04035 888 aa23.77■■□□□ 1.4
MRPL40-201ENST00000333130 HOXC6P09630 235 aa23.77■■□□□ 1.4
MRPL40-201ENST00000333130 PDIA3P30101 505 aaKnown RBP23.77■■□□□ 1.4
MRPL40-201ENST00000333130 ABHD8Q96I13 439 aa23.77■■□□□ 1.4
MRPL40-201ENST00000333130 TMTC3Q6ZXV5 915 aa23.76■■□□□ 1.39
MRPL40-201ENST00000333130 MTMR8Q96EF0 704 aa23.76■■□□□ 1.39
MRPL40-201ENST00000333130 FAM217BQ9NTX9 383 aaPredicted RBP23.76■■□□□ 1.39
MRPL40-201ENST00000333130 TPCN1Q9ULQ1 816 aa23.76■■□□□ 1.39
MRPL40-201ENST00000333130 MRPL11Q9Y3B7 192 aaKnown RBP23.76■■□□□ 1.39
MRPL40-201ENST00000333130 PNMA6FA0A0J9YX94 578 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 PLEKHA8P1O95397 391 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 ELNP15502 786 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 SLC35G1Q2M3R5 365 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 SH3TC2Q8TF17 1288 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 ARMC5Q96C12 935 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 PIGSQ96S52 555 aa23.75■■□□□ 1.39
MRPL40-201ENST00000333130 MFSD14CQ5VZR4 134 aa23.74■■□□□ 1.39
MRPL40-201ENST00000333130 NSMFQ6X4W1 530 aa23.74■■□□□ 1.39
MRPL40-201ENST00000333130 LARP6Q9BRS8 491 aaKnown RBP23.74■■□□□ 1.39
MRPL40-201ENST00000333130 MAF1Q9H063 256 aa23.74■■□□□ 1.39
MRPL40-201ENST00000333130 DIS3Q9Y2L1 958 aaKnown RBP23.74■■□□□ 1.39
MRPL40-201ENST00000333130 CYTH3O43739 400 aa23.73■■□□□ 1.39
MRPL40-201ENST00000333130 ST18O60284 1047 aa23.73■■□□□ 1.39
MRPL40-201ENST00000333130 CDC27P30260 824 aa23.73■■□□□ 1.39
MRPL40-201ENST00000333130 MUM1L1Q5H9M0 696 aa23.73■■□□□ 1.39
MRPL40-201ENST00000333130 MCF2L2Q86YR7 1114 aa23.73■■□□□ 1.39
MRPL40-201ENST00000333130 SRBD1Q8N5C6 995 aaKnown RBP23.73■■□□□ 1.39
MRPL40-201ENST00000333130 A1CFQ9NQ94 594 aaKnown RBP23.73■■□□□ 1.39
MRPL40-201ENST00000333130 PTPDC1A2A3K4 754 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 POTEB2H3BUK9 544 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 INHAP05111 366 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 PGK2P07205 417 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 OLFML2BQ68BL8 750 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 PIBF1Q8WXW3 757 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 TRIB2Q92519 343 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 PCDHA1Q9Y5I3 950 aa23.72■■□□□ 1.39
MRPL40-201ENST00000333130 CENPFP49454 3210 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 PFKFB2O60825 505 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 COBLO75128 1261 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 FUT2Q10981 343 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
MRPL40-201ENST00000333130 CCDC82Q8N4S0 544 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 ZNF333Q96JL9 665 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 RBM27Q9P2N5 1060 aaKnown RBP23.71■■□□□ 1.39
MRPL40-201ENST00000333130 LIMCH1Q9UPQ0 1083 aa23.71■■□□□ 1.39
MRPL40-201ENST00000333130 NFIBO00712 420 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 CPLX1O14810 134 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 CD2BP2O95400 341 aaKnown RBP23.7■■□□□ 1.38
MRPL40-201ENST00000333130 LARGE1O95461 756 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 ME3Q16798 604 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 RNF207Q6ZRF8 634 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 CMTR1Q8N1G2 835 aaKnown RBP23.7■■□□□ 1.38
MRPL40-201ENST00000333130 MSL3Q8N5Y2 521 aaKnown RBP23.7■■□□□ 1.38
MRPL40-201ENST00000333130 NPLOC4Q8TAT6 608 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 MAML3Q96JK9 1138 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 CYP39A1Q9NYL5 469 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 CNTNAP5Q8WYK1 1306 aa23.7■■□□□ 1.38
MRPL40-201ENST00000333130 DNAJC25-GNG10A0A024R161 153 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 TAL1P17542 331 aaPredicted RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 ADD1P35611 737 aaKnown RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 AKAP17AQ02040 695 aaKnown RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 CCL14Q16627 93 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 ZNF792Q3KQV3 632 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 ZNF467Q7Z7K2 595 aaPredicted RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 RGS22Q8NE09 1264 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 CLEC4DQ8WXI8 215 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 MPHOSPH6Q99547 160 aaKnown RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 TMEM106CQ9BVX2 250 aa23.69■■□□□ 1.38
MRPL40-201ENST00000333130 NCOA5Q9HCD5 579 aaKnown RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 ADD3Q9UEY8 706 aaKnown RBP23.69■■□□□ 1.38
MRPL40-201ENST00000333130 CCDC85CA6NKD9 419 aa23.68■■□□□ 1.38
MRPL40-201ENST00000333130 CCT2P78371 535 aaKnown RBP23.68■■□□□ 1.38
MRPL40-201ENST00000333130 SCRN1Q12765 414 aa23.68■■□□□ 1.38
MRPL40-201ENST00000333130 NTRK3Q16288 839 aa23.68■■□□□ 1.38
MRPL40-201ENST00000333130 NOL8Q76FK4 1167 aaKnown RBP23.68■■□□□ 1.38
MRPL40-201ENST00000333130 SAMD3Q8N6K7 520 aa23.68■■□□□ 1.38
MRPL40-201ENST00000333130 SLKQ9H2G2 1235 aaPredicted RBP23.68■■□□□ 1.38
MRPL40-201ENST00000333130 MCM3APO60318 1980 aa23.68■■□□□ 1.38
MRPL40-201ENST00000333130 PRKAR2AP13861 404 aaKnown RBP23.67■■□□□ 1.38
MRPL40-201ENST00000333130 CALML3P27482 149 aa23.67■■□□□ 1.38
MRPL40-201ENST00000333130 MCM2P49736 904 aa23.67■■□□□ 1.38
MRPL40-201ENST00000333130 STK3Q13188 491 aa23.67■■□□□ 1.38
MRPL40-201ENST00000333130 GTF3C6Q969F1 213 aa23.67■■□□□ 1.38
MRPL40-201ENST00000333130 KIAA0100Q14667 2235 aaKnown RBP23.67■■□□□ 1.38
MRPL40-201ENST00000333130 B4DLN1 442 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms