RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
SYN3-201ENST00000332840 PLXNB2O15031 1838 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 B4E1Z4 1266 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 MCM5P33992 734 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
SYN3-201ENST00000332840 CCL14Q16627 93 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 BTNL9Q6UXG8 535 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 KCTD1Q719H9 257 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 UBE2Q1Q7Z7E8 422 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 ANKS1AQ92625 1134 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 CHMP4CQ96CF2 233 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 ZSCAN10Q96SZ4 725 aaPredicted RBP11.31□□□□□ -0.6
SYN3-201ENST00000332840 AGXT2Q9BYV1 514 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
SYN3-201ENST00000332840 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
SYN3-201ENST00000332840 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 ZNF236Q9UL36 1845 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 ERICH2A1L162 156 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 COBLO75128 1261 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 IGHA2P01877 340 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 PDHBP11177 359 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 ZNF543Q08ER8 600 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 TRIM32Q13049 653 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 COL9A3Q14050 684 aaPredicted RBP11.3□□□□□ -0.6
SYN3-201ENST00000332840 ME3Q16798 604 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
SYN3-201ENST00000332840 CCDC83Q8IWF9 413 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
SYN3-201ENST00000332840 ANKRD35Q8N283 1001 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 NPLOC4Q8TAT6 608 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 MAML3Q96JK9 1138 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
SYN3-201ENST00000332840 ANP32EQ9BTT0 268 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 ZSWIM5Q9P217 1185 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 PRR12Q9ULL5 1215 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 TPCN1Q9ULQ1 816 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 PFASO15067 1338 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 TNKSO95271 1327 aa11.3□□□□□ -0.6
SYN3-201ENST00000332840 MYH8P13535 1937 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 PRC1O43663 620 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 LARGE1O95461 756 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 ICAM1P05362 532 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 CYBAP13498 195 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 CNGA1P29973 690 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 CYP2C19P33261 490 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 ZNF792Q3KQV3 632 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 ENAHQ8N8S7 591 aaPredicted RBP11.29□□□□□ -0.6
SYN3-201ENST00000332840 BRF1Q92994 677 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 TINF2Q9BSI4 451 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 RANBP17Q9H2T7 1088 aaKnown RBP11.29□□□□□ -0.6
SYN3-201ENST00000332840 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 FLRT1Q9NZU1 646 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 DDX20Q9UHI6 824 aaKnown RBP11.29□□□□□ -0.6
SYN3-201ENST00000332840 SYNGAP1Q96PV0 1343 aa11.29□□□□□ -0.6
SYN3-201ENST00000332840 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 SEPT4O43236 478 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 PGK2P07205 417 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
SYN3-201ENST00000332840 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
SYN3-201ENST00000332840 CLCN6P51797 869 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
SYN3-201ENST00000332840 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
SYN3-201ENST00000332840 TMEM87BQ96K49 555 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 ZKSCAN3Q9BRR0 538 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 LRRC2Q9BYS8 371 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 MAF1Q9H063 256 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 PRO3102Q9H379 93 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 RIPK3Q9Y572 518 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
SYN3-201ENST00000332840 EVI5O60447 810 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 PFKFB2O60825 505 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.61
SYN3-201ENST00000332840 ALAS1P13196 640 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 EVCP57679 992 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 ANTXR2P58335 489 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 TRAF1Q13077 416 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 LHX8Q68G74 356 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 Q7L0L9 218 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 NECAB1Q8N987 351 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 TRERF1Q96PN7 1200 aa11.27□□□□□ -0.61
SYN3-201ENST00000332840 GPCPD1Q9NPB8 672 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms