RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 MAGEA1P43355 309 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 CRKLP46109 303 aaKnown RBP9.71□□□□□ -0.85
LIMK2-201ENST00000331728 SPTY2D1Q68D10 685 aaPredicted RBP9.71□□□□□ -0.85
LIMK2-201ENST00000331728 CCDC170Q8IYT3 715 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 RAB34Q9BZG1 259 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 CENPHQ9H3R5 247 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 ZNF287Q9HBT7 754 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 LRWD1Q9UFC0 647 aa9.71□□□□□ -0.85
LIMK2-201ENST00000331728 MYO5AQ9Y4I1 1855 aaKnown RBP9.71□□□□□ -0.86
LIMK2-201ENST00000331728 COL5A2P05997 1499 aaPredicted RBP9.71□□□□□ -0.86
LIMK2-201ENST00000331728 ERCC3P19447 782 aa9.71□□□□□ -0.86
LIMK2-201ENST00000331728 GGCXP38435 758 aa9.71□□□□□ -0.86
LIMK2-201ENST00000331728 C8orf74Q6P047 294 aa9.71□□□□□ -0.86
LIMK2-201ENST00000331728 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
LIMK2-201ENST00000331728 SELENOOQ9BVL4 669 aa9.71□□□□□ -0.86
LIMK2-201ENST00000331728 ATP8A2Q9NTI2 1148 aa9.71□□□□□ -0.86
LIMK2-201ENST00000331728 TRPM3Q9HCF6 1732 aaPredicted RBP9.71□□□□□ -0.86
LIMK2-201ENST00000331728 LRRC10BA6NIK2 292 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 RNF225M0QZC1 329 aaPredicted RBP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 MYL1P05976 194 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 OR52Z1P0C646 297 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 VAV2P52735 878 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 NONOQ15233 471 aaKnown RBP eCLIP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 TAF4BQ92750 862 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 ZHX3Q9H4I2 956 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 TNS2Q63HR2 1409 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 ANO9A1A5B4 782 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 GOLGA6L10A6NI86 522 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 CPP00450 1065 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 KRT18P05783 430 aaKnown RBP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 PLCG1P19174 1290 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 GNA11P29992 359 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 E2F4Q16254 413 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 RRAGAQ7L523 313 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 KRT25Q7Z3Z0 450 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 HYOU1Q9Y4L1 999 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 ERLIN2O94905 339 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 BAG3O95817 575 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 CCT5P48643 541 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 AGPAT5Q9NUQ2 364 aa9.7□□□□□ -0.86
LIMK2-201ENST00000331728 REXO2Q9Y3B8 237 aaKnown RBP9.7□□□□□ -0.86
LIMK2-201ENST00000331728 PDS5AQ29RF7 1337 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 DCCP43146 1447 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 ORC4O43929 436 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 TCP1P17987 556 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 TXKP42681 527 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 MECOMQ03112 1051 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 KCNB1Q14721 858 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 PAPD7Q5XG87 772 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 DYMQ7RTS9 669 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 ANKRD13CQ8N6S4 541 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 RIOK1Q9BRS2 568 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 CUEDC2Q9H467 287 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 MAGEF1Q9HAY2 307 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 SLC39A2Q9NP94 309 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 DCP1AQ9NPI6 582 aaPredicted RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 GEMIN8Q9NWZ8 242 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 AKAP11Q9UKA4 1901 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 ZNF185O15231 689 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 RAD21O60216 631 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 IQCDQ96DY2 449 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 DNAJC7Q99615 494 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 FAM184BQ9ULE4 1060 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 CHD4Q14839 1912 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 TULP1O00294 542 aaPredicted RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 LAD1O00515 517 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 SRGNP10124 158 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 TECP42680 631 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 LIG3P49916 1009 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 HERVK_113P62684 666 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 MRPS25P82663 173 aaKnown RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 FUT2Q10981 343 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 HLTFQ14527 1009 aaKnown RBP eCLIP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 GALNT17Q6IS24 598 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 CCNI2Q6ZMN8 369 aaPredicted RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 CCDC84Q86UT8 332 aaPredicted RBP9.69□□□□□ -0.86
LIMK2-201ENST00000331728 IFT81Q8WYA0 676 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 NOX5Q96PH1 765 aa9.69□□□□□ -0.86
LIMK2-201ENST00000331728 MOCS3O95396 460 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 USP17L8P0C7I0 530 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 USP8P40818 1118 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 GNGT1P63211 74 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 ARID5AQ03989 594 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 DDB1Q16531 1140 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 CFAP58Q5T655 872 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 MCTP2Q6DN12 878 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 KRT26Q7Z3Y9 468 aa9.68□□□□□ -0.86
LIMK2-201ENST00000331728 MYCBPQ99417 103 aaPredicted RBP9.68□□□□□ -0.86
LIMK2-201ENST00000331728 CAPS2Q9BXY5 557 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms