RNA–Protein interactions for RNA: ENST00000331194.8

CCDC88C-201, Transcript of coiled-coil domain containing 88C, humanhuman

TSL 5 BASIC

Gene CCDC88C, Length 3,104 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-201ENST00000331194 ALS2CLQ60I27 953 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 IQCKQ8N0W5 287 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 EHBP1Q8NDI1 1231 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 HELBQ8NG08 1087 aaPredicted RBP14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 OR2W6PQ8NHA6 318 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 TRIM47Q96LD4 638 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 CCDC114Q96M63 670 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 VEZTQ9HBM0 779 aa14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
CCDC88C-201ENST00000331194 NEBLO76041 1014 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 PLEKHA8P1O95397 391 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 SMTNP53814 917 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 TBC1D8BQ0IIM8 1120 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 MEA1Q16626 185 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 AKNAD1Q5T1N1 836 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 CHADLQ6NUI6 762 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 C8orf74Q6P047 294 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 TMC4Q7Z404 712 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 PURBQ96QR8 312 aaKnown RBP14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 UBAC1Q9BSL1 405 aa14.96□□□□□ -0.01
CCDC88C-201ENST00000331194 ANO9A1A5B4 782 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 PP2D1A8MPX8 630 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 QPCTQ16769 361 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 TTC38Q5R3I4 469 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 IQCEQ6IPM2 695 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 TICAM2Q86XR7 235 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 CCDC42Q96M95 316 aa14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 ZNHIT6Q9NWK9 470 aaKnown RBP14.96□□□□□ -0.02
CCDC88C-201ENST00000331194 UTRNP46939 3433 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 C21orf2O43822 256 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 KRT2P35908 639 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 PDE6BP35913 854 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 VAV2P52735 878 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 EMBQ6PCB8 327 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 MAGEB6Q8N7X4 407 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 TUBGCP2Q9BSJ2 902 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 RGPD5Q99666 1765 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 H7C1D1 291 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 EPHB6O15197 1021 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 GTPBP6O43824 516 aaPredicted RBP14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 PPP1R12BO60237 982 aaPredicted RBP14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 TMOD1P28289 359 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 BIRC2Q13490 618 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 KDM7AQ6ZMT4 941 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 TTYH3Q9C0H2 523 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 MDH1P40925 334 aaKnown RBP14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 PIK3AP1Q6ZUJ8 805 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 FAXDC2Q96IV6 333 aa14.95□□□□□ -0.02
CCDC88C-201ENST00000331194 TCRBV5S4A2TA0A5A2 114 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 MAATS1Q7Z4T9 603 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 ADSSL1Q8N142 457 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 FERMT2Q96AC1 680 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 PCDHA13Q9Y5I0 950 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 TACC1O75410 805 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 HEXIM1O94992 359 aaKnown RBP14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 CABP4P57796 275 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 SPA17Q15506 151 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 CYB5D1Q6P9G0 228 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 LDHAL6AQ6ZMR3 332 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 MIGA1Q8NAN2 632 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 STAG1Q8WVM7 1258 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 PHF20Q9BVI0 1012 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 ARHGAP20Q9P2F6 1191 aa14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 TPX2Q9ULW0 747 aaKnown RBP14.94□□□□□ -0.02
CCDC88C-201ENST00000331194 PDS5AQ29RF7 1337 aaKnown RBP14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 CDR1P51861 262 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 GRIPAP1Q4V328 841 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 MICALCLQ6ZW33 695 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 PARP9Q8IXQ6 854 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 FNBP4Q8N3X1 1017 aaPredicted RBP14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 TRIM58Q8NG06 486 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 CAVIN3Q969G5 261 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 CYFIP2Q96F07 1278 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 EXOC1Q9NV70 894 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 ERICH2A1L162 156 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 SRGNP10124 158 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 NAIF1Q69YI7 327 aaPredicted RBP14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 C6orf89Q6UWU4 347 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 FUKQ8N0W3 1084 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 HPS3Q969F9 1004 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 SH2D4AQ9H788 454 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 FAM207AQ9NSI2 230 aaPredicted RBP14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 MEGF6O75095 1541 aa14.93□□□□□ -0.02
CCDC88C-201ENST00000331194 A0A1W2PQC6 194 aa14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 MINDY4BA8MYZ0 360 aa14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 EIF4A3P38919 411 aaKnown RBP14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 UBE3CQ15386 1083 aa14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 NPY5RQ15761 445 aa14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 CCDC121Q6ZUS5 278 aa14.92□□□□□ -0.02
CCDC88C-201ENST00000331194 TLR10Q9BXR5 811 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms