RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 GPIHBP1Q8IV16 184 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 TBC1D7Q9P0N9 293 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 HERC5Q9UII4 1024 aaKnown RBP17.96■□□□□ 0.47
PDGFB-201ENST00000331163 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
PDGFB-201ENST00000331163 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 EIF2AK2P19525 551 aaKnown RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 EPHX2P34913 555 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 CAP2P40123 477 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 PDE4CQ08493 712 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 SMYD4Q8IYR2 804 aaPredicted RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 CHURC1Q8WUH1 139 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 DDX19AQ9NUU7 478 aaKnown RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 HOOK1Q9UJC3 728 aaKnown RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 WNT7AO00755 349 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 NCAPH2Q6IBW4 605 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 NCAPG2Q86XI2 1143 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 IDI2Q9BXS1 227 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 ZBTB22O15209 634 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 FAM160A1Q05DH4 1040 aa17.95■□□□□ 0.46
PDGFB-201ENST00000331163 RPAP3Q9H6T3 665 aaPredicted RBP17.95■□□□□ 0.46
PDGFB-201ENST00000331163 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
PDGFB-201ENST00000331163 NEMFO60524 1076 aa17.94■□□□□ 0.46
PDGFB-201ENST00000331163 SYMPKQ92797 1274 aaKnown RBP17.94■□□□□ 0.46
PDGFB-201ENST00000331163 CLMNQ96JQ2 1002 aa17.94■□□□□ 0.46
PDGFB-201ENST00000331163 ZBTB5O15062 677 aa17.94■□□□□ 0.46
PDGFB-201ENST00000331163 LRMPQ12912 555 aa17.94■□□□□ 0.46
PDGFB-201ENST00000331163 TRMT44Q8IYL2 757 aaKnown RBP17.94■□□□□ 0.46
PDGFB-201ENST00000331163 PRR12Q9ULL5 1215 aa17.94■□□□□ 0.46
PDGFB-201ENST00000331163 AKAP11Q9UKA4 1901 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 VGLL3A8MV65 326 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-201ENST00000331163 PDIA4P13667 645 aaKnown RBP17.93■□□□□ 0.46
PDGFB-201ENST00000331163 SLC39A14Q15043 492 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 WDR19Q8NEZ3 1342 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 ERICH4A6NGS2 130 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 POTEMA6NI47 508 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 MEIS1O00470 390 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 TMEM266Q2M3C6 531 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 AOPEPQ8N6M6 819 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 TRERF1Q96PN7 1200 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 PNMA6FA0A0J9YX94 578 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 CALCRLQ16602 461 aa17.93■□□□□ 0.46
PDGFB-201ENST00000331163 PCMTD1Q96MG8 357 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-201ENST00000331163 PURBQ96QR8 312 aaKnown RBP17.93■□□□□ 0.46
PDGFB-201ENST00000331163 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
PDGFB-201ENST00000331163 FAM170AA1A519 330 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 RRAGBQ5VZM2 374 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 NEK8Q86SG6 692 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 GPC2Q8N158 579 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 GOLGA6L6A8MZA4 724 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 SERPINC1P01008 464 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 SLC10A4Q96EP9 437 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 FOXP1Q9H334 677 aaPredicted RBP17.92■□□□□ 0.46
PDGFB-201ENST00000331163 BARHL2Q9NY43 387 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 RCOR1Q9UKL0 485 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 PALM3A6NDB9 673 aaPredicted RBP17.92■□□□□ 0.46
PDGFB-201ENST00000331163 HIRAP54198 1017 aaPredicted RBP17.92■□□□□ 0.46
PDGFB-201ENST00000331163 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
PDGFB-201ENST00000331163 LONRF3Q496Y0 759 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 ZBED4O75132 1171 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 GABPAQ06546 454 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 LRWD1Q9UFC0 647 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 TAF1LQ8IZX4 1826 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 AP5Z1O43299 807 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 ANKRD35Q8N283 1001 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 TMEM60Q9H2L4 133 aa17.91■□□□□ 0.46
PDGFB-201ENST00000331163 STAT3P40763 770 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 TOB1P50616 345 aaPredicted RBP17.9■□□□□ 0.46
PDGFB-201ENST00000331163 ASIC1P78348 528 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 C10orf71Q711Q0 1435 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 APOBEC3FQ8IUX4 373 aaKnown RBP17.9■□□□□ 0.46
PDGFB-201ENST00000331163 SNX29Q8TEQ0 813 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 STXBP3O00186 592 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 YEATS4O95619 227 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 RPS12P25398 132 aaKnown RBP17.9■□□□□ 0.46
PDGFB-201ENST00000331163 TPM4P67936 248 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 KRT25Q7Z3Z0 450 aa17.9■□□□□ 0.46
PDGFB-201ENST00000331163 CALML4Q96GE6 196 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 GMLQ99445 158 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 PHF20Q9BVI0 1012 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 DDX25Q9UHL0 483 aaKnown RBP17.89■□□□□ 0.46
PDGFB-201ENST00000331163 NRBP1Q9UHY1 535 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 PCDHA6Q9UN73 950 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 PCDHA8Q9Y5H6 950 aa17.89■□□□□ 0.46
PDGFB-201ENST00000331163 EVCP57679 992 aa17.89■□□□□ 0.45
PDGFB-201ENST00000331163 SNRNP48Q6IEG0 339 aaKnown RBP17.89■□□□□ 0.45
PDGFB-201ENST00000331163 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
PDGFB-201ENST00000331163 KCNF1Q9H3M0 494 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms