RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 CABP7Q86V35 215 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 IRF2BP1Q8IU81 584 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 ZNF579Q8NAF0 562 aaKnown RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 RPGRQ92834 1020 aaKnown RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 LACRTQ9GZZ8 138 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.14
BEST3-202ENST00000330891 DISC1Q9NRI5 854 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 LUC7L2Q9Y383 392 aaKnown RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 COL5A3P25940 1745 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 NPHP3-ACAD11A0A0J9YXS1 232 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 EPS15P42566 896 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 CDK8P49336 464 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 VSNL1P62760 191 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 CCDC96Q2M329 555 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 NT5DC1Q5TFE4 455 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 CNBD1Q8NA66 436 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 RUFY1Q96T51 708 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 KCNQ5Q9NR82 932 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 PCDHA4Q9UN74 947 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.91□□□□□ -1.14
BEST3-202ENST00000330891 EPN1Q9Y6I3 576 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 NUP188Q5SRE5 1749 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 GTPBP6O43824 516 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 ATP1A1P05023 1023 aaKnown RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 SLC7A5Q01650 507 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 SF3B3Q15393 1217 aaKnown RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 CCDC181Q5TID7 509 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 TTC19Q6DKK2 380 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 ZSCAN29Q8IWY8 852 aaPredicted RBP7.91□□□□□ -1.14
BEST3-202ENST00000330891 AK7Q96M32 723 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 BCS1LQ9Y276 419 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 ATRNO75882 1429 aa7.91□□□□□ -1.14
BEST3-202ENST00000330891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 EPHB6O15197 1021 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 BUB1O43683 1085 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 CALM1P0DP23 149 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 CALM2P0DP24 149 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 CALM3P0DP25 149 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 TDRD12Q587J7 1177 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 CDKAL1Q5VV42 579 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 MSL1Q68DK7 614 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 DPP8Q6V1X1 898 aaPredicted RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 TUBGCP2Q9BSJ2 902 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 NOC4LQ9BVI4 516 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 TCP11L1Q9NUJ3 509 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 EXOC1Q9NV70 894 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 NCK2O43639 380 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 MYO1BO43795 1136 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 NPM3O75607 178 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 DDAH1O94760 285 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 RASA1P20936 1047 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 HNRNPH2P55795 449 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 TRAPPC3LQ5T215 181 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 ZNF658Q5TYW1 1059 aaPredicted RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 C2CD5Q86YS7 1000 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 BCAS3Q9H6U6 928 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 MLXIPQ9HAP2 919 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 ATP8A2Q9NTI2 1148 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 SEC63Q9UGP8 760 aaKnown RBP7.9□□□□□ -1.14
BEST3-202ENST00000330891 ANAPC4Q9UJX5 808 aa7.9□□□□□ -1.14
BEST3-202ENST00000330891 MYH13Q9UKX3 1938 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 LAMB1P07942 1786 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 VGLL3A8MV65 326 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L15C9J2P7 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L13C9JLJ4 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L11C9JVI0 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L18D6R9N7 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L22D6RA61 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L17D6RBQ6 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L19D6RCP7 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L20D6RJB6 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 SLC37A4O43826 429 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L24Q0WX57 530 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 EZH2Q15910 746 aaKnown RBP7.9□□□□□ -1.15
BEST3-202ENST00000330891 TAF3Q5VWG9 929 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 USP17L6PQ6QN14 398 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 CNGA4Q8IV77 575 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 TRIML1Q8N9V2 468 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 SPATA20Q8TB22 786 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 MMS19Q96T76 1030 aa7.9□□□□□ -1.15
BEST3-202ENST00000330891 ARPP21Q9UBL0 812 aaPredicted RBP7.9□□□□□ -1.15
BEST3-202ENST00000330891 REXO2Q9Y3B8 237 aaKnown RBP7.9□□□□□ -1.15
BEST3-202ENST00000330891 MYH14Q7Z406 1995 aaKnown RBP7.89□□□□□ -1.15
BEST3-202ENST00000330891 CTAGE15A4D2H0 777 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 MEIS1O00470 390 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 PSMA7O14818 248 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 NDUFA10O95299 355 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 BAG3O95817 575 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 CTAGE8P0CG41 777 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 TM4SF1P30408 202 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 C2orf54Q08AI8 447 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 KCNK18Q7Z418 384 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 CTAGE6Q86UF2 777 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 CTAGE4Q8IX94 777 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 MB21D1Q8N884 522 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 C4orf32Q8N8J7 132 aa7.89□□□□□ -1.15
BEST3-202ENST00000330891 SMARCC1Q92922 1105 aaPredicted RBP7.89□□□□□ -1.15
BEST3-202ENST00000330891 CNOT6LQ96LI5 555 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms