RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 KANK3Q6NY19 840 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 KBTBD3Q8NAB2 608 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 MIGA1Q8NAN2 632 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 DNAJC2Q99543 621 aaKnown RBP7.62□□□□□ -1.19
SMG1-201ENST00000330588 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
SMG1-201ENST00000330588 SRRDQ9UH36 339 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 ZBTB21Q9ULJ3 1066 aa7.62□□□□□ -1.19
SMG1-201ENST00000330588 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 TRIM75PA6NK02 468 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 GLRX3O76003 335 aaKnown RBP7.61□□□□□ -1.19
SMG1-201ENST00000330588 IRS1P35568 1242 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 MCCD1P59942 119 aaPredicted RBP7.61□□□□□ -1.19
SMG1-201ENST00000330588 SPP2Q13103 211 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 RRP1BQ14684 758 aaKnown RBP7.61□□□□□ -1.19
SMG1-201ENST00000330588 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 LBX2Q6XYB7 198 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 GADL1Q6ZQY3 521 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 AMOTL1Q8IY63 956 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 CCDC82Q8N4S0 544 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 ZNF333Q96JL9 665 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 CCDC17Q96LX7 622 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 KIAA1683Q9H0B3 1180 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 BOLA2Q9H3K6 86 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 TMOD4Q9NZQ9 345 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 MORF4L1Q9UBU8 362 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
SMG1-201ENST00000330588 ROBO3Q96MS0 1386 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 SALL3Q9BXA9 1300 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 FAM196BA6NMK8 535 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 GNAT2P19087 354 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 SHMT1P34896 483 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 PSMC4P43686 418 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 HMGCS2P54868 508 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 CAP1Q01518 475 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 DBN1Q16643 649 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 CERKLQ49MI3 558 aaPredicted RBP7.6□□□□□ -1.19
SMG1-201ENST00000330588 SLC9C1Q4G0N8 1177 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 SBK1Q52WX2 424 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 RNF20Q5VTR2 975 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 SMCR8Q8TEV9 937 aaPredicted RBP7.6□□□□□ -1.19
SMG1-201ENST00000330588 APPBP2Q92624 585 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
SMG1-201ENST00000330588 GRIP2Q9C0E4 1043 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 ARPP21Q9UBL0 812 aaPredicted RBP7.6□□□□□ -1.19
SMG1-201ENST00000330588 CPA4Q9UI42 421 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 PTCH2Q9Y6C5 1203 aa7.6□□□□□ -1.19
SMG1-201ENST00000330588 MBD4O95243 580 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
SMG1-201ENST00000330588 CYP2C8P10632 490 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 MARSP56192 900 aaKnown RBP7.59□□□□□ -1.19
SMG1-201ENST00000330588 ABCB5Q2M3G0 1257 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 C12orf60Q5U649 245 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 TMEM179Q6ZVK1 233 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 LCORLQ8N3X6 602 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 GLMNQ92990 594 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 ASCC2Q9H1I8 757 aaPredicted RBP7.59□□□□□ -1.19
SMG1-201ENST00000330588 MCM9Q9NXL9 1143 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 STAP2Q9UGK3 403 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 SAP30BPQ9UHR5 308 aaKnown RBP7.59□□□□□ -1.19
SMG1-201ENST00000330588 SYNPO2Q9UMS6 1093 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 MYH8P13535 1937 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 GREB1LQ9C091 1923 aaPredicted RBP7.59□□□□□ -1.19
SMG1-201ENST00000330588 ZSWIM8A7E2V4 1837 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 MYPNQ86TC9 1320 aa7.59□□□□□ -1.19
SMG1-201ENST00000330588 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 MEN1O00255 615 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 RNF113AO15541 343 aaKnown RBP7.59□□□□□ -1.2
SMG1-201ENST00000330588 GH2P01242 217 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 GRK4P32298 578 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 PLCD1P51178 756 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 IRX3P78415 501 aaPredicted RBP7.59□□□□□ -1.2
SMG1-201ENST00000330588 JAG1P78504 1218 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 NR1H3Q13133 447 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 CLN3Q13286 438 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 WDR44Q5JSH3 913 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 TREML2Q5T2D2 321 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 C16orf86Q6ZW13 317 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 PI4K2BQ8TCG2 481 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 LPAR1Q92633 364 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 COA7Q96BR5 231 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 EDC3Q96F86 508 aaKnown RBP7.59□□□□□ -1.2
SMG1-201ENST00000330588 ARHGAP39Q9C0H5 1083 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 SH2D4AQ9H788 454 aa7.59□□□□□ -1.2
SMG1-201ENST00000330588 A0A0G2JMZ2 1700 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 ZNF236Q9UL36 1845 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L15C9J2P7 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L13C9JLJ4 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L11C9JVI0 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L18D6R9N7 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L22D6RA61 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L17D6RBQ6 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L19D6RCP7 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 USP17L20D6RJB6 530 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 SMARCA5O60264 1052 aaPredicted RBP7.58□□□□□ -1.2
SMG1-201ENST00000330588 IGHA1P01876 353 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 MX1P20591 662 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 CTGFP29279 349 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 MAPK4P31152 587 aa7.58□□□□□ -1.2
SMG1-201ENST00000330588 GUCY1A2P33402 732 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms