RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 NLRP5P59047 1200 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 USH1GQ495M9 461 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 PGBD1Q96JS3 809 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 AMNQ9BXJ7 453 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 ASCC2Q9H1I8 757 aaPredicted RBP21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 PCDHA1Q9Y5I3 950 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 ZNF536O15090 1300 aa21.49■■□□□ 1.03
EXOSC3-201ENST00000327304 YEATS4O95619 227 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 XRCC6P12956 609 aaKnown RBP eCLIP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 CCDC148Q8NFR7 591 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 ADAMTS5Q9UNA0 930 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 MYPNQ86TC9 1320 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 FAM155AB1AL88 458 aaPredicted RBP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 BTBD19C9JJ37 291 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 ZBED4O75132 1171 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 IRX3P78415 501 aaPredicted RBP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 SAFBQ15424 915 aaKnown RBP eCLIP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 DIS3L2Q8IYB7 885 aaKnown RBP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 OXER1Q8TDS5 423 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 HOXC10Q9NYD6 342 aa21.48■■□□□ 1.03
EXOSC3-201ENST00000327304 COL11A1P12107 1806 aaPredicted RBP21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 SMCHD1A6NHR9 2005 aa21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 NASPP49321 788 aaPredicted RBP21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 POTEEQ6S8J3 1075 aa21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 HHIPL1Q96JK4 782 aa21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 AGBL1Q96MI9 1066 aa21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 RAVER2Q9HCJ3 691 aaKnown RBP21.47■■□□□ 1.03
EXOSC3-201ENST00000327304 ICAM1P05362 532 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 APLP1P51693 650 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 PABPC4Q13310 644 aaKnown RBP eCLIP21.46■■□□□ 1.031e-12■□□□□ 9.3
EXOSC3-201ENST00000327304 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 PPP1R18Q6NYC8 613 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 CPXCR1Q8N123 301 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 PTPN18Q99952 460 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 ZMYND12Q9H0C1 365 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 FOXP1Q9H334 677 aaPredicted RBP21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 A0A0G2JMZ2 1700 aa21.46■■□□□ 1.03
EXOSC3-201ENST00000327304 SMCO2A6NFE2 343 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 BTBD18B2RXH4 712 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 FDX1P10109 184 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 NR5A1Q13285 461 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 FAM177A1Q8N128 213 aaPredicted RBP21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 LINC00301Q8NCQ3 95 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 KCNG4Q8TDN1 519 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 FTOQ9C0B1 505 aaKnown RBP eCLIP21.45■■□□□ 1.031e-6■□□□□ 8.2
EXOSC3-201ENST00000327304 DDX19AQ9NUU7 478 aaKnown RBP21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 CCPG1Q9ULG6 757 aa21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 CTDP1Q9Y5B0 961 aaPredicted RBP21.45■■□□□ 1.03
EXOSC3-201ENST00000327304 ESYT2A0FGR8 921 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 PDHXO00330 501 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 OSBPP22059 807 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 CALML3P27482 149 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 KRT2P35908 639 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 HERVK_113P62684 666 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 ANKRD23Q86SG2 305 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 FAM43AQ8N2R8 423 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 BICD2Q8TD16 824 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 CCDC102AQ96A19 550 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 PCDHA4Q9UN74 947 aa21.45■■□□□ 1.02
EXOSC3-201ENST00000327304 TESPA1A2RU30 521 aaPredicted RBP21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 PEX10O60683 326 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 LIG1P18858 919 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 TMEM132BQ14DG7 1078 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 CYP4F22Q6NT55 531 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 PAXIP1Q6ZW49 1069 aaPredicted RBP21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 DAGLBQ8NCG7 672 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 CREBZFQ9NS37 354 aa21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 ZNF214Q9UL59 606 aaPredicted RBP21.44■■□□□ 1.02
EXOSC3-201ENST00000327304 MANSC4A6NHS7 340 aaPredicted RBP21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 CYP2C8P10632 490 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 ADCY7P51828 1080 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 GRM1Q13255 1194 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 TPRNQ4KMQ1 711 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 ANO1Q5XXA6 986 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 NOSTRINQ8IVI9 506 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 BLIDQ8IZY5 108 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 RASGRP4Q8TDF6 673 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 C6orf50Q9HD87 102 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 SLC45A1Q9Y2W3 748 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 CLIC4Q9Y696 253 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 OPLAHO14841 1288 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 STK38Q15208 465 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 GALNT17Q6IS24 598 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 LBX2Q6XYB7 198 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 TNFRSF25Q93038 417 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 BRMS1Q9HCU9 246 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 RIC8AQ9NPQ8 531 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 BTBD7Q9P203 1132 aa21.43■■□□□ 1.02
EXOSC3-201ENST00000327304 TRAF1Q13077 416 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 ADALQ6DHV7 355 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 ZIC5Q96T25 663 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 TSPY26PQ9H489 355 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 PSTPIP2Q9H939 334 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 PNMA3Q9UL41 463 aa21.42■■□□□ 1.02
EXOSC3-201ENST00000327304 ABCB11O95342 1321 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms