RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 VEZTQ9HBM0 779 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 ITGB4P16144 1822 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 ITIH6Q6UXX5 1313 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 MAP3K15Q6ZN16 1313 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 UBN2Q6ZU65 1347 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 A0A087X0B3 334 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 MACROD2A1Z1Q3 448 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 OPA1O60313 960 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 KRT14P02533 472 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 PCCAP05165 728 aaPredicted RBP8.2□□□□□ -1.1
CLRN1-202ENST00000327047 IDEP14735 1019 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 HERVK_113P62684 666 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 PAPD7Q5XG87 772 aaKnown RBP8.2□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 KANK3Q6NY19 840 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 CYB5R4Q7L1T6 521 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 TSEN2Q8NCE0 465 aaKnown RBP8.2□□□□□ -1.1
CLRN1-202ENST00000327047 FAM89AQ96GI7 184 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 LRRC1Q9BTT6 524 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 HAUS4Q9H6D7 363 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
CLRN1-202ENST00000327047 ANGEL1Q9UNK9 670 aaKnown RBP8.2□□□□□ -1.1
CLRN1-202ENST00000327047 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
CLRN1-202ENST00000327047 C4AP0C0L4 1744 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 C4BP0C0L5 1744 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SPDYE2BA6NHP3 402 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 HSF2BPO75031 334 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SPDYE6P0CI01 402 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 GUCY1A2P33402 732 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 APBA1Q02410 837 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 UBXN1Q04323 297 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 DPYDQ12882 1025 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 IFT88Q13099 833 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 NR5A1Q13285 461 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SPDYE2Q495Y8 402 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC40Q4G0X9 1142 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 PREPLQ4J6C6 727 aaPredicted RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 CEP85LQ5SZL2 805 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 NAA35Q5VZE5 725 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 APOA5Q6Q788 366 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 IQCA1Q86XH1 822 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 DIS3L2Q8IYB7 885 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 KIRREL3Q8IZU9 778 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SPATA20Q8TB22 786 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 EPSTI1Q96J88 318 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 RPGRIP1Q96KN7 1286 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 PUS7LQ9H0K6 701 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 BRCA1P38398 1863 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 TTC26A0AVF1 554 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 GOLGA8AA7E2F4 631 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 STARD3NLO95772 234 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 PDHBP11177 359 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 CDR1P51861 262 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SEC24CP53992 1094 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 NAP1L1P55209 391 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 NNTQ13423 1086 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 CAMK2BQ13554 666 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 CCDC13Q8IYE1 715 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 ZBTB38Q8NAP3 1195 aaPredicted RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 RNPC3Q96LT9 517 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 TACO1Q9BSH4 297 aaKnown RBP8.19□□□□□ -1.1
CLRN1-202ENST00000327047 ZBTB1Q9Y2K1 713 aa8.19□□□□□ -1.1
CLRN1-202ENST00000327047 RCCD1A6NED2 376 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 B4E1Z4 1266 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 ZBTB43O43298 467 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 GCFC2P16383 781 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 LSP1P33241 339 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 LBX1P52954 281 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SKOR1P84550 965 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SSRP1Q08945 709 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SAFBQ15424 915 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 NTRK3Q16288 839 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 MICALCLQ6ZW33 695 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 CMTR1Q8N1G2 835 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 ZNF473Q8WTR7 871 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PAGE5Q96GU1 130 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 FAXDC2Q96IV6 333 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PSMB7Q99436 277 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PSMD1Q99460 953 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 BLZF1Q9H2G9 400 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 VCPKMTQ9H867 229 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SLC40A1Q9NP59 571 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SMARCAL1Q9NZC9 954 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 MAPK8IP1Q9UQF2 711 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PNPLA7Q6ZV29 1317 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 ATXN2Q99700 1313 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 KCNJ18B7U540 433 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 PATL2C9JE40 543 aaKnown RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 SH2B2O14492 632 aaPredicted RBP8.18□□□□□ -1.1
CLRN1-202ENST00000327047 KRT86O43790 486 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 MMP1P03956 469 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 ADORA1P30542 326 aa8.18□□□□□ -1.1
CLRN1-202ENST00000327047 HDLBPQ00341 1268 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms