RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CDC25AP30304 524 aa22.3■■□□□ 1.16
SOX2-201ENST00000325404 PPP4CP60510 307 aa22.3■■□□□ 1.16
SOX2-201ENST00000325404 DZIP1Q86YF9 867 aaKnown RBP22.3■■□□□ 1.16
SOX2-201ENST00000325404 TTC26A0AVF1 554 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 GSTO1P78417 241 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 GPSM2P81274 684 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 ORC2Q13416 577 aaPredicted RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 MEA1Q16626 185 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 TSR1Q2NL82 804 aaKnown RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 AMOTL1Q8IY63 956 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 WDR66Q8TBY9 1149 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 CRAMP1Q96RY5 1269 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 SLF1Q9BQI6 1058 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 MYO6Q9UM54 1294 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 PALM3A6NDB9 673 aaPredicted RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 POLR3GO15318 223 aaPredicted RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 COBLL1Q53SF7 1204 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 TTI2Q6NXR4 508 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 C15orf52Q6ZUT6 534 aaKnown RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 ZNF804AQ7Z570 1209 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 GPKOWQ92917 476 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SOX2-201ENST00000325404 EXOC4Q96A65 974 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 MAGEC2Q9UBF1 373 aaPredicted RBP22.29■■□□□ 1.16
SOX2-201ENST00000325404 L1RE1Q9UN81 338 aa22.29■■□□□ 1.16
SOX2-201ENST00000325404 MYH8P13535 1937 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 STXBP3O00186 592 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 COBLO75128 1261 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 SRGNP10124 158 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 ATP2B4P23634 1241 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 KRT83P78385 493 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 TYW1BQ6NUM6 668 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 STAG2Q8N3U4 1231 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 EHBP1Q8NDI1 1231 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 CCDC47Q96A33 483 aaKnown RBP22.28■■□□□ 1.16
SOX2-201ENST00000325404 IQCDQ96DY2 449 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 REXO2Q9Y3B8 237 aaKnown RBP22.28■■□□□ 1.16
SOX2-201ENST00000325404 WDR93Q6P2C0 686 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 TMEM60Q9H2L4 133 aa22.28■■□□□ 1.16
SOX2-201ENST00000325404 BICDL2A1A5D9 508 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 UFL1O94874 794 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 SMARCA1P28370 1054 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 FAM114A1Q8IWE2 563 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 PNKPQ96T60 521 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 CHP1Q99653 195 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 SPZ1Q9BXG8 430 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 ZSWIM4Q9H7M6 989 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 GGA1Q9UJY5 639 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 EIF3JO75822 258 aaKnown RBP22.27■■□□□ 1.16
SOX2-201ENST00000325404 TRAPPC11Q7Z392 1133 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 KRT25Q7Z3Z0 450 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 ZMYND12Q9H0C1 365 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 MKNK2Q9HBH9 465 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 ZNF287Q9HBT7 754 aa22.27■■□□□ 1.16
SOX2-201ENST00000325404 BAG3O95817 575 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 C7orf25Q9BPX7 421 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 LDHBP07195 334 aaKnown RBP22.26■■□□□ 1.15
SOX2-201ENST00000325404 CCNE1P24864 410 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 HOXA7P31268 230 aaPredicted RBP22.26■■□□□ 1.15
SOX2-201ENST00000325404 CDK17Q00537 523 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 FIGNQ5HY92 759 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 TMC4Q7Z404 712 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 CCDC170Q8IYT3 715 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 RASSF8Q8NHQ8 419 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 RPGRIP1Q96KN7 1286 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 TTYH3Q9C0H2 523 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 MAPK8IP1Q9UQF2 711 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 JAG2Q9Y219 1238 aa22.26■■□□□ 1.15
SOX2-201ENST00000325404 BAZ2BQ9UIF8 2168 aaKnown RBP22.26■■□□□ 1.15
SOX2-201ENST00000325404 TRIM49BA6NDI0 452 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 ABL1P00519 1130 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 PMS1P54277 932 aaKnown RBP22.25■■□□□ 1.15
SOX2-201ENST00000325404 INF2Q27J81 1249 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 SLC35G1Q2M3R5 365 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 RASGRP4Q8TDF6 673 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 FLT1P17948 1338 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 CYTH3O43739 400 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 LDHCP07864 332 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 TSPY3P0CV98 308 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 TSPY8P0CW00 308 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 PAPD7Q5XG87 772 aaKnown RBP22.25■■□□□ 1.15
SOX2-201ENST00000325404 WDR59Q6PJI9 974 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 ZNF444Q8N0Y2 327 aaPredicted RBP22.25■■□□□ 1.15
SOX2-201ENST00000325404 GPR101Q96P66 508 aaPredicted RBP22.25■■□□□ 1.15
SOX2-201ENST00000325404 EXOC1Q9NV70 894 aa22.25■■□□□ 1.15
SOX2-201ENST00000325404 ERICH4A6NGS2 130 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 MCM3P25205 808 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 MUM1L1Q5H9M0 696 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 DUSP9Q99956 384 aaKnown RBP22.24■■□□□ 1.15
SOX2-201ENST00000325404 A0A1W2PQJ5 194 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 CYLC1P35663 651 aaPredicted RBP22.24■■□□□ 1.15
SOX2-201ENST00000325404 HEATR3Q7Z4Q2 680 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 P2RX5Q93086 422 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 ABCB6Q9NP58 842 aa22.24■■□□□ 1.15
SOX2-201ENST00000325404 OR52Z1P0C646 297 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 ZBED6P86452 979 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 AMPD3Q01432 767 aa22.23■■□□□ 1.15
SOX2-201ENST00000325404 CABP7Q86V35 215 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms