RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 NFIBO00712 420 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 SH2B2O14492 632 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 TROAPQ12815 778 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 QRICH1Q2TAL8 776 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 GPHNQ9NQX3 736 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 DDAH1O94760 285 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 ABCB11O95342 1321 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 BAATQ14032 418 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 ANO1Q5XXA6 986 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 RNF207Q6ZRF8 634 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 CLEC4DQ8WXI8 215 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 DPF3Q92784 378 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 FGD4Q96M96 766 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 C11orf49Q9H6J7 331 aa17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-201ENST00000321253 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 SOWAHBA6NEL2 793 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 ASB14A6NK59 587 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 SNAI1O95863 264 aaPredicted RBP17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 RARBP10826 455 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 AKR1A1P14550 325 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 KIF5BP33176 963 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 LIFRP42702 1097 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 CCDC144CPQ8IYA2 1237 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 MAP3K14Q99558 947 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 LRRC2Q9BYS8 371 aa17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
TUBA3D-201ENST00000321253 MYH6P13533 1939 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 ZNF865P0CJ78 1059 aaPredicted RBP17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 CALM1P0DP23 149 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 CALM2P0DP24 149 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 CALM3P0DP25 149 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 CALML3P27482 149 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 HSPA4P34932 840 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 HOMER1Q86YM7 354 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 ARRDC4Q8NCT1 418 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 ABHD16BQ9H3Z7 469 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
TUBA3D-201ENST00000321253 ZBTB5O15062 677 aa17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 ACVR2BQ13705 512 aa17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 ADCK5Q3MIX3 580 aa17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 PRPF38BQ5VTL8 546 aaKnown RBP17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 XPNPEP3Q9NQH7 507 aa17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 MRPL11Q9Y3B7 192 aaKnown RBP17.03■□□□□ 0.32
TUBA3D-201ENST00000321253 MCM3APO60318 1980 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 DNM1LO00429 736 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 GNAQP50148 359 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 RPS6P62753 249 aaKnown RBP17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 TRAF1Q13077 416 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 MCF2L2Q86YR7 1114 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 MTMR8Q96EF0 704 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.32
TUBA3D-201ENST00000321253 KBTBD13C9JR72 458 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 FGD1P98174 961 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 GJC2Q5T442 439 aaPredicted RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 KCNB2Q92953 911 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 JAKMIP1Q96N16 626 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 PIGSQ96S52 555 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 LZTS2Q9BRK4 669 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 MAF1Q9H063 256 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 ASTN1O14525 1302 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 EVI5O60447 810 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 ALDH5A1P51649 535 aaPredicted RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 RNF180Q86T96 592 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 SNX14Q9Y5W7 946 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 NR2E3Q9Y5X4 410 aa17.01■□□□□ 0.31
TUBA3D-201ENST00000321253 LCTP09848 1927 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 PNMA6FA0A0J9YX94 578 aa17■□□□□ 0.31
TUBA3D-201ENST00000321253 B4DLN1 442 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms