RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 MOCS3O95396 460 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 TOB1P50616 345 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 ATP2C1P98194 919 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 SLC7A5Q01650 507 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 RASSF7Q02833 373 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 CCDC26Q8TAB7 109 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 PLA2G12BQ9BX93 195 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 EPB41L4AQ9HCS5 686 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 H3BQF6 201 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 CSF1RP07333 972 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 IL6STP40189 918 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 TBX2Q13207 712 aaPredicted RBP14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 NTRK3Q16288 839 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 CCDC155Q8N6L0 562 aa14.12□□□□□ -0.15
DNMT3A-202ENST00000321117 CETN3O15182 167 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 MRPS25P82663 173 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 NEK8Q86SG6 692 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 PIGBQ92521 554 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 CABS1Q96KC9 395 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 L1RE1Q9UN81 338 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 APBA1Q02410 837 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 DCAF17Q5H9S7 520 aaPredicted RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 NELFCDQ8IXH7 590 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 ANKS4BQ8N8V4 417 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 SELENOSQ9BQE4 189 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 PPANQ9NQ55 473 aaKnown RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 TBC1D7Q9P0N9 293 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 LAD1O00515 517 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 DDB1Q16531 1140 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 HERC4Q5GLZ8 1057 aaPredicted RBP14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 MSANTD4Q8NCY6 345 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 ATP8A2Q9NTI2 1148 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 TRIM10Q9UDY6 481 aa14.11□□□□□ -0.15
DNMT3A-202ENST00000321117 KLRF2D3W0D1 207 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 GOLGA8HP0CJ92 632 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 KIF11P52732 1056 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 UBE4AQ14139 1066 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 ICE2Q659A1 982 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 TADA2BQ86TJ2 420 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 ZNF512BQ96KM6 892 aaPredicted RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 SCLT1Q96NL6 688 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 LSM14BQ9BX40 385 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 TMEM94Q12767 1356 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 CCDC172P0C7W6 258 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 KRT13P13646 458 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 PLCG1P19174 1290 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 SPATS2Q86XZ4 545 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 AK8Q96MA6 479 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 VIPAS39Q9H9C1 493 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 BIN2Q9UBW5 565 aaPredicted RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 PCDHA13Q9Y5I0 950 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 SMIM23A6NLE4 172 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 HEXIM1O94992 359 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 MAN2A1Q16706 1144 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 MYOCDQ8IZQ8 938 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 EPB41L5Q9HCM4 733 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 RASAL2Q9UJF2 1139 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 A0A1W2PQC6 194 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 EMBQ6PCB8 327 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 KIFC2Q96AC6 838 aa14.1□□□□□ -0.15
DNMT3A-202ENST00000321117 ERVV-1B6SEH8 477 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 PPP1R3GB7ZBB8 358 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 KCNK3O14649 394 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 CALRP27797 417 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 GBP2P32456 591 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 EHHADHQ08426 723 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 TBC1D5Q92609 795 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 PHF20Q9BVI0 1012 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 CAPN11Q9UMQ6 739 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 PNPLA7Q6ZV29 1317 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 POLR2FP61218 127 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 CETN1Q12798 172 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 CERS3Q8IU89 383 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 TEX11Q8IYF3 940 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 RPGRQ92834 1020 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 KRT12Q99456 494 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 INTS13Q9NVM9 706 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 STIM2Q9P246 746 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 KDM6AO15550 1401 aaPredicted RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 TARSL2A2RTX5 802 aaKnown RBP14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 C6orf229H3BNL8 230 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 PLCG2P16885 1265 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 ZNF804AQ7Z570 1209 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 TRIM31Q9BZY9 425 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 NYXQ9GZU5 481 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 ANKZF1Q9H8Y5 726 aa14.09□□□□□ -0.15
DNMT3A-202ENST00000321117 ADCY7P51828 1080 aa14.08□□□□□ -0.15
DNMT3A-202ENST00000321117 MRPL12P52815 198 aaKnown RBP14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms