RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 ZCWPW1Q9H0M4 648 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 GREM2Q9H772 168 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 REXO2Q9Y3B8 237 aaKnown RBP16.63■□□□□ 0.25
SCAP-202ENST00000320017 MINDY4BA8MYZ0 360 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 PRKAB2O43741 272 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 PPP6R2O75170 966 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 PECAM1P16284 738 aaPredicted RBP16.63■□□□□ 0.25
SCAP-202ENST00000320017 RNASE9P60153 205 aaKnown RBP16.63■□□□□ 0.25
SCAP-202ENST00000320017 CUL5Q93034 780 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
SCAP-202ENST00000320017 PAFAH1B1P43034 410 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 MCAMP43121 646 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 NR5A1Q13285 461 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 MORC3Q14149 939 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 CCDC63Q8NA47 563 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 PAIP2Q9BPZ3 127 aaKnown RBP16.63■□□□□ 0.25
SCAP-202ENST00000320017 SEC31BQ9NQW1 1179 aa16.63■□□□□ 0.25
SCAP-202ENST00000320017 PYGLP06737 847 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 EMBQ6PCB8 327 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
SCAP-202ENST00000320017 ARMT1Q9H993 441 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
SCAP-202ENST00000320017 PHKA1P46020 1223 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 KRT31Q15323 416 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 QPCTQ16769 361 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 BATF3Q9NR55 127 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 STIM2Q9P246 746 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
SCAP-202ENST00000320017 ZBTB43O43298 467 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 GUCY2DQ02846 1103 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 DRP2Q13474 957 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 SLC30A9Q6PML9 568 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
SCAP-202ENST00000320017 LACRTQ9GZZ8 138 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 PIH1D3Q9NQM4 214 aaKnown RBP16.61■□□□□ 0.25
SCAP-202ENST00000320017 ABCC6O95255 1503 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 GMNCA6NCL1 334 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 ZSCAN5CA6NGD5 496 aaPredicted RBP16.61■□□□□ 0.25
SCAP-202ENST00000320017 SMIM24O75264 130 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 NEFHP12036 1026 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 CD44P16070 742 aaKnown RBP16.61■□□□□ 0.25
SCAP-202ENST00000320017 ITGA6P23229 1130 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 ICA1Q05084 483 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 SEC16BQ96JE7 1060 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 KIF5AQ12840 1032 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 PTPAQ15257 358 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 PTF1AQ7RTS3 328 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 SPATA4Q8NEY3 305 aa16.61■□□□□ 0.25
SCAP-202ENST00000320017 ZNHIT6Q9NWK9 470 aaKnown RBP16.61■□□□□ 0.25
SCAP-202ENST00000320017 ZNF233A6NK53 670 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 PHF20L1A8MW92 1017 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 FAM153BP0C7A2 387 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 ERCC5P28715 1186 aaPredicted RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 CARSP49589 748 aaKnown RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 KRT83P78385 493 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 FAM153CQ494X1 144 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 FAM133BQ5BKY9 247 aaKnown RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 MB21D2Q8IYB1 491 aaPredicted RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 ARFGAP2Q8N6H7 521 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 APPBP2Q92624 585 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 EPB41L5Q9HCM4 733 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 ABCF2Q9UG63 623 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 FAM153AQ9UHL3 310 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 C15orf41Q9Y2V0 281 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 NKX1-1Q15270 411 aaPredicted RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 ZC3H12AQ5D1E8 599 aaKnown RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 GKAP1Q5VSY0 366 aaPredicted RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 RRAGBQ5VZM2 374 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 OR8K1Q8NGG5 319 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 KCNV2Q8TDN2 545 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 ANGEL1Q9UNK9 670 aaKnown RBP16.6■□□□□ 0.25
SCAP-202ENST00000320017 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCAP-202ENST00000320017 SLC12A7Q9Y666 1083 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 PRDM1O75626 825 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 HERVK_113P62684 666 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 TRIM58Q8NG06 486 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 OR2W6PQ8NHA6 318 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 ATP6V1G3Q96LB4 118 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 TSC22D3Q99576 134 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 LEMD3Q9Y2U8 911 aa16.6■□□□□ 0.25
SCAP-202ENST00000320017 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
SCAP-202ENST00000320017 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 RAB27AP51159 221 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
SCAP-202ENST00000320017 SIK1P57059 783 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 ELF3P78545 371 aaPredicted RBP16.59■□□□□ 0.25
SCAP-202ENST00000320017 NAPBQ9H115 298 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
SCAP-202ENST00000320017 EPB41P11171 864 aaKnown RBP16.59■□□□□ 0.25
SCAP-202ENST00000320017 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms