RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 CSPP1Q1MSJ5 1256 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
MSRA-201ENST00000317173 BICD2Q8TD16 824 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 ZNF396Q96N95 335 aaPredicted RBP16.16■□□□□ 0.18
MSRA-201ENST00000317173 SLF1Q9BQI6 1058 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 AMNQ9BXJ7 453 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 RPAP3Q9H6T3 665 aaPredicted RBP16.16■□□□□ 0.18
MSRA-201ENST00000317173 C6orf50Q9HD87 102 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 CFAP45Q9UL16 551 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
MSRA-201ENST00000317173 BTBD18B2RXH4 712 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 PDHXO00330 501 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 TLR2O60603 784 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 MOGSQ13724 837 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 ARHGEF6Q15052 776 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 NPY5RQ15761 445 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 TYW1BQ6NUM6 668 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 FBXO11Q86XK2 927 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 BLIDQ8IZY5 108 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
MSRA-201ENST00000317173 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
MSRA-201ENST00000317173 KIF28PB7ZC32 967 aa16.14■□□□□ 0.18
MSRA-201ENST00000317173 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.18
MSRA-201ENST00000317173 MYSM1Q5VVJ2 828 aa16.14■□□□□ 0.18
MSRA-201ENST00000317173 KIFC2Q96AC6 838 aa16.14■□□□□ 0.18
MSRA-201ENST00000317173 SCAND2PQ9GZW5 306 aaPredicted RBP16.14■□□□□ 0.18
MSRA-201ENST00000317173 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.18
MSRA-201ENST00000317173 SLC45A1Q9Y2W3 748 aa16.14■□□□□ 0.18
MSRA-201ENST00000317173 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
MSRA-201ENST00000317173 FLOT1O75955 427 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
MSRA-201ENST00000317173 TMEM87AQ8NBN3 555 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 PCDHA1Q9Y5I3 950 aa16.14■□□□□ 0.17
MSRA-201ENST00000317173 M0R2N6 131 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 ADCY7P51828 1080 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
MSRA-201ENST00000317173 RILPL1Q5EBL4 403 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 MCTP2Q6DN12 878 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 GPAT2Q6NUI2 795 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 CD99L2Q8TCZ2 262 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 COA7Q96BR5 231 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 FBXO28Q9NVF7 368 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
MSRA-201ENST00000317173 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
MSRA-201ENST00000317173 CCDC85CA6NKD9 419 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
MSRA-201ENST00000317173 NR5A1Q13285 461 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 COG2Q14746 738 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 KIF22Q14807 665 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 OTOP1Q7RTM1 612 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 CUL5Q93034 780 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
MSRA-201ENST00000317173 AGTPBP1Q9UPW5 1226 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 A0A0G2JMZ2 1700 aa16.12■□□□□ 0.17
MSRA-201ENST00000317173 ELP1O95163 1332 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 ABCB11O95342 1321 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 RBBP6Q7Z6E9 1792 aaKnown RBP16.11■□□□□ 0.17
MSRA-201ENST00000317173 ZBED4O75132 1171 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 ICAM1P05362 532 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
MSRA-201ENST00000317173 DSG3P32926 999 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 TRAPPC10P48553 1259 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 OAZ1P54368 228 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
MSRA-201ENST00000317173 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
MSRA-201ENST00000317173 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
MSRA-201ENST00000317173 KRT25Q7Z3Z0 450 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 HOXC10Q9NYD6 342 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 ADAMTS5Q9UNA0 930 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
MSRA-201ENST00000317173 YEATS4O95619 227 aa16.1■□□□□ 0.17
MSRA-201ENST00000317173 REXO1Q8N1G1 1221 aaKnown RBP16.1■□□□□ 0.17
MSRA-201ENST00000317173 PSTPIP2Q9H939 334 aa16.1■□□□□ 0.17
MSRA-201ENST00000317173 RTEL1Q9NZ71 1219 aa16.1■□□□□ 0.17
MSRA-201ENST00000317173 PCDHA6Q9UN73 950 aa16.1■□□□□ 0.17
MSRA-201ENST00000317173 MRPL11Q9Y3B7 192 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms