RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
CCDC89-201ENST00000316398 MTIF3Q9H2K0 278 aaKnown RBP13.63□□□□□ -0.23
CCDC89-201ENST00000316398 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
CCDC89-201ENST00000316398 MYH7P12883 1935 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 NCOR1O75376 2440 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 PLIN4Q96Q06 1357 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 DYNC1LI2O43237 492 aaPredicted RBP13.62□□□□□ -0.23
CCDC89-201ENST00000316398 ZEB2O60315 1214 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
CCDC89-201ENST00000316398 SMPD1P17405 629 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 MCCP23508 829 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 SLC1A4P43007 532 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 NOVP48745 357 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 BEX3Q00994 111 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 ADGRE1Q14246 886 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 FSCN1Q16658 493 aaKnown RBP13.62□□□□□ -0.23
CCDC89-201ENST00000316398 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 PPP1R12CQ9BZL4 782 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 AP5M1Q9H0R1 490 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 HIPK3Q9H422 1215 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 SLC28A3Q9HAS3 691 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 CXXC1Q9P0U4 656 aaPredicted RBP13.62□□□□□ -0.23
CCDC89-201ENST00000316398 RCAN3Q9UKA8 241 aa13.62□□□□□ -0.23
CCDC89-201ENST00000316398 LOC102724159A0A0B4J2E5 919 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 M0R2C6 588 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 MRPS5P82675 430 aaKnown RBP13.61□□□□□ -0.23
CCDC89-201ENST00000316398 PWP2Q15269 919 aaKnown RBP13.61□□□□□ -0.23
CCDC89-201ENST00000316398 NOL8Q76FK4 1167 aaKnown RBP13.61□□□□□ -0.23
CCDC89-201ENST00000316398 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
CCDC89-201ENST00000316398 VWCEQ96DN2 955 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
CCDC89-201ENST00000316398 IL17RBQ9NRM6 502 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 HOMER2Q9NSB8 354 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
CCDC89-201ENST00000316398 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
CCDC89-201ENST00000316398 PPARAQ07869 468 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 TLK2Q86UE8 772 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 TRPV6Q9H1D0 765 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 PDGFCQ9NRA1 345 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 CHD7Q9P2D1 2997 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 MCM3APO60318 1980 aa13.6□□□□□ -0.23
CCDC89-201ENST00000316398 TTC41PQ6P2S7 1318 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 RBM47A0AV96 593 aaKnown RBP13.59□□□□□ -0.23
CCDC89-201ENST00000316398 B4GALT4O60513 344 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 FGRP09769 529 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 SUPT20HL2P0C7V6 817 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 ZMYM1Q5SVZ6 1142 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 SEC62Q99442 399 aaKnown RBP13.59□□□□□ -0.23
CCDC89-201ENST00000316398 VTA1Q9NP79 307 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 PRR12Q9ULL5 1215 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCDC89-201ENST00000316398 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 UMODL1Q5DID0 1318 aa13.59□□□□□ -0.23
CCDC89-201ENST00000316398 ICAM1P05362 532 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 ALAS1P13196 640 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 MUM1L1Q5H9M0 696 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 BTNL9Q6UXG8 535 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 PPM1EQ8WY54 764 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 NAPBQ9H115 298 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 WNT8AQ9H1J5 351 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
CCDC89-201ENST00000316398 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 YBX2Q9Y2T7 364 aaKnown RBP13.58□□□□□ -0.24
CCDC89-201ENST00000316398 SLC4A7Q9Y6M7 1214 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 TRANK1O15050 2925 aa13.58□□□□□ -0.24
CCDC89-201ENST00000316398 ERC2O15083 957 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 PFKMP08237 780 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 BMP1P13497 986 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 CCL23P55773 120 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 NKX2-4Q9H2Z4 354 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 STX8Q9UNK0 236 aa13.57□□□□□ -0.24
CCDC89-201ENST00000316398 COL9A1P20849 921 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 IGFBP4P22692 258 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
CCDC89-201ENST00000316398 ALX1Q15699 326 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 CCDC85BQ15834 202 aaPredicted RBP13.56□□□□□ -0.24
CCDC89-201ENST00000316398 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 PHOSPHO2Q8TCD6 241 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 TSPYL2Q9H2G4 693 aaPredicted RBP13.56□□□□□ -0.24
CCDC89-201ENST00000316398 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 POLR3EQ9NVU0 708 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 ADD3Q9UEY8 706 aaKnown RBP13.56□□□□□ -0.24
CCDC89-201ENST00000316398 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 FOXP2O15409 715 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 ORC4O43929 436 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 PSMC6P62333 389 aa13.56□□□□□ -0.24
CCDC89-201ENST00000316398 PURAQ00577 322 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms