RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PLA2G4DQ86XP0 818 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 ABCC6O95255 1503 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 PARP4Q9UKK3 1724 aaKnown RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 ZEB2O60315 1214 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 MRPS25P82663 173 aaKnown RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 MUM1L1Q5H9M0 696 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 MAGEB6Q8N7X4 407 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 SUGT1Q9Y2Z0 365 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 VWA3AA6NCI4 1184 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 SPOPO43791 374 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 PDE4DQ08499 809 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 TNFAIP1Q13829 316 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 MCF2L2Q86YR7 1114 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 GPT2Q8TD30 523 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 NUF2Q9BZD4 464 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 TNFAIP3P21580 790 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 CEP170BQ9Y4F5 1589 aaPredicted RBP9.66□□□□□ -0.86
COL6A5-202ENST00000312481 SMARCA1P28370 1054 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 VPS52Q8N1B4 723 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 UBA5Q9GZZ9 404 aa9.66□□□□□ -0.86
COL6A5-202ENST00000312481 NALCNQ8IZF0 1738 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 COL15A1P39059 1388 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 CHUKO15111 745 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 PFKFB1P16118 471 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 CTNNA1P35221 906 aaKnown RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 MXRA7P84157 204 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 KRT71Q3SY84 523 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 EIF1ADQ8N9N8 165 aaKnown RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 SCLT1Q96NL6 688 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 CTNND2Q9UQB3 1225 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 CDC37L1Q7L3B6 337 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 NECAB1Q8N987 351 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 NR1I2O75469 434 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 TFCP2Q12800 502 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 RAPGEF1Q13905 1077 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 PAF1Q8N7H5 531 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 TMEM206Q9H813 350 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 MRPL47Q9HD33 250 aaKnown RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 ODF2LQ9ULJ1 636 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 GIPC1O14908 333 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 ENOSF1Q7L5Y1 443 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 PPP1R12AO14974 1030 aaPredicted RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 KIAA0391O15091 583 aaKnown RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 PHACTR2O75167 634 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 OR52Z1P0C646 297 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 SCG2P13521 617 aa9.65□□□□□ -0.86
COL6A5-202ENST00000312481 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.86
COL6A5-202ENST00000312481 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.87
COL6A5-202ENST00000312481 KCNB1Q14721 858 aa9.65□□□□□ -0.87
COL6A5-202ENST00000312481 TERF2Q15554 542 aa9.65□□□□□ -0.87
COL6A5-202ENST00000312481 FRMD8Q9BZ67 464 aaPredicted RBP9.65□□□□□ -0.87
COL6A5-202ENST00000312481 LRRD1A4D1F6 860 aa9.65□□□□□ -0.87
COL6A5-202ENST00000312481 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.87
COL6A5-202ENST00000312481 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.87
COL6A5-202ENST00000312481 SERPINB4P48594 390 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 BLIDQ8IZY5 108 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SPATA5Q8NB90 893 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CPLX3Q8WVH0 158 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CENPKQ9BS16 269 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SLITRK6Q9H5Y7 841 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ATXN2Q99700 1313 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SPDYE4A6NLX3 237 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ATP5BP06576 529 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SLC20A2Q08357 652 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 RESP18Q5W5W9 173 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 IPO11Q9UI26 975 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 TRPC6Q9Y210 931 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 GSPT1P15170 499 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CASP14P31944 242 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 KIAA1586Q9HCI6 787 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ANGPTL2Q9UKU9 493 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 TRIM72Q6ZMU5 477 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ZNF654Q8IZM8 581 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 MCM9Q9NXL9 1143 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SETD1AO15047 1707 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CLNS1AP54105 237 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CCDC89Q8N998 374 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 MCM7P33993 719 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 CDKL2Q92772 493 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 RBM17Q96I25 401 aaKnown RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 SERPINI1Q99574 410 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ZNF215Q9UL58 517 aaPredicted RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 RIBC1Q8N443 379 aaPredicted RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 FANCBQ8NB91 859 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
COL6A5-202ENST00000312481 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
COL6A5-202ENST00000312481 DCAF8L1A6NGE4 600 aa9.63□□□□□ -0.87
COL6A5-202ENST00000312481 SERPING1P05155 500 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms