RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 C11orf57Q6ZUT1 292 aaPredicted RBP18.98■□□□□ 0.63
CLCF1-201ENST00000312438 CEP57L1Q8IYX8 460 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 ZNF341Q9BYN7 854 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 PPP2R3BQ9Y5P8 575 aa18.98■□□□□ 0.63
CLCF1-201ENST00000312438 OR52Z1P0C646 297 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 TXLNAP40222 546 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 SNAP25P60880 206 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 POSTNQ15063 836 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 IQUBQ8NA54 791 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 DHX58Q96C10 678 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 TRIM44Q96DX7 344 aaPredicted RBP18.97■□□□□ 0.63
CLCF1-201ENST00000312438 GLIS2Q9BZE0 524 aaPredicted RBP18.97■□□□□ 0.63
CLCF1-201ENST00000312438 PCDHA5Q9Y5H7 936 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 HIRAP54198 1017 aaPredicted RBP18.97■□□□□ 0.63
CLCF1-201ENST00000312438 IQCB1Q15051 598 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 ZYXQ15942 572 aaKnown RBP18.97■□□□□ 0.63
CLCF1-201ENST00000312438 PPP4R3AQ6IN85 833 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 TEX2Q8IWB9 1127 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 FEZ1Q99689 392 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 NAP1L4Q99733 375 aaKnown RBP18.97■□□□□ 0.63
CLCF1-201ENST00000312438 RNF181Q9P0P0 153 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 ZNF112Q9UJU3 913 aa18.97■□□□□ 0.63
CLCF1-201ENST00000312438 A0A087X0B3 334 aa18.96■□□□□ 0.63
CLCF1-201ENST00000312438 DDNO94850 711 aaPredicted RBP18.96■□□□□ 0.63
CLCF1-201ENST00000312438 LPAR1Q92633 364 aa18.96■□□□□ 0.63
CLCF1-201ENST00000312438 AK8Q96MA6 479 aa18.96■□□□□ 0.63
CLCF1-201ENST00000312438 KIAA1683Q9H0B3 1180 aa18.96■□□□□ 0.63
CLCF1-201ENST00000312438 BECN2A8MW95 431 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L15C9J2P7 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L13C9JLJ4 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L11C9JVI0 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L18D6R9N7 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L22D6RA61 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L17D6RBQ6 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L19D6RCP7 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L20D6RJB6 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 GOLGA6L19H0YKK7 550 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 BIN1O00499 593 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 MEIS2O14770 477 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 FOXN1O15353 648 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 EDIL3O43854 480 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L24Q0WX57 530 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 AP3B2Q13367 1082 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 NT5DC1Q5TFE4 455 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP17L6PQ6QN14 398 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 CCDC84Q86UT8 332 aaPredicted RBP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 BPIFA3Q9BQP9 254 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 GGA3Q9NZ52 723 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 A0A087WWV3 80 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 ADCY5O95622 1261 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 FOSP01100 380 aaPredicted RBP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 INPP5BP32019 993 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 SARSP49591 514 aaKnown RBP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USP11P51784 963 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 DPCR1Q3MIW9 517 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 USH1GQ495M9 461 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 SH3RF1Q7Z6J0 888 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 KIFC2Q96AC6 838 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 PAGE5Q96GU1 130 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 CCSER1Q9C0I3 900 aa18.95■□□□□ 0.62
CLCF1-201ENST00000312438 RANBP17Q9H2T7 1088 aaKnown RBP18.95■□□□□ 0.62
CLCF1-201ENST00000312438 GCFC2P16383 781 aaKnown RBP18.94■□□□□ 0.62
CLCF1-201ENST00000312438 UBA7P41226 1012 aa18.94■□□□□ 0.62
CLCF1-201ENST00000312438 PLCB2Q00722 1185 aa18.94■□□□□ 0.62
CLCF1-201ENST00000312438 SUPT20HL1Q3ZLR7 823 aa18.94■□□□□ 0.62
CLCF1-201ENST00000312438 SMARCE1Q969G3 411 aa18.94■□□□□ 0.62
CLCF1-201ENST00000312438 MTMR9Q96QG7 549 aa18.94■□□□□ 0.62
CLCF1-201ENST00000312438 ADARB2Q9NS39 739 aaKnown RBP18.94■□□□□ 0.62
CLCF1-201ENST00000312438 WDR46O15213 610 aaKnown RBP18.93■□□□□ 0.62
CLCF1-201ENST00000312438 SMC2O95347 1197 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 E2F4Q16254 413 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 CALCRLQ16602 461 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 SCYL3Q8IZE3 742 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 SPATA20Q8TB22 786 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 CCDC39Q9UFE4 941 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 TDP2O95551 362 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 CDC25AP30304 524 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 PRAMEF18Q5VWM3 479 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 ISM2Q6H9L7 571 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 DHX40Q8IX18 779 aaKnown RBP18.93■□□□□ 0.62
CLCF1-201ENST00000312438 TRIML1Q8N9V2 468 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 ANO3Q9BYT9 981 aa18.93■□□□□ 0.62
CLCF1-201ENST00000312438 PIK3CDO00329 1044 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 PRR29P0C7W0 189 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 USP14P54578 494 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 C9orf131Q5VYM1 1079 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 POTEDQ86YR6 584 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 PRPF38AQ8NAV1 312 aaKnown RBP18.92■□□□□ 0.62
CLCF1-201ENST00000312438 WRNIP1Q96S55 665 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
CLCF1-201ENST00000312438 AP5Z1O43299 807 aa18.91■□□□□ 0.62
CLCF1-201ENST00000312438 SLC37A4O43826 429 aa18.91■□□□□ 0.62
CLCF1-201ENST00000312438 TECP42680 631 aa18.91■□□□□ 0.62
CLCF1-201ENST00000312438 TXKP42681 527 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms