RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 TCP11L1Q9NUJ3 509 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 MYO6Q9UM54 1294 aa28.4■■■□□ 2.14
HOXB3-201ENST00000311626 EIF6P56537 245 aaKnown RBP28.39■■■□□ 2.14
HOXB3-201ENST00000311626 CLEC10AQ8IUN9 316 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 DAGLBQ8NCG7 672 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 UIMC1Q96RL1 719 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 CCDC151A5D8V7 595 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 USP17L5A8MUK1 530 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 TXKP42681 527 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 GRAPQ13588 217 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 POTEDQ86YR6 584 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 GRAPLQ8TC17 118 aaPredicted RBP28.39■■■□□ 2.14
HOXB3-201ENST00000311626 TBCKQ8TEA7 893 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 CEP95Q96GE4 821 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 TRIM9Q9C026 710 aa28.39■■■□□ 2.14
HOXB3-201ENST00000311626 CTAGE15A4D2H0 777 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 RCCD1A6NED2 376 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 ATP8B1O43520 1251 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 CTAGE8P0CG41 777 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 RFC4P35249 363 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 NONOQ15233 471 aaKnown RBP eCLIP28.39■■■□□ 2.13
HOXB3-201ENST00000311626 BEND6Q5SZJ8 279 aaPredicted RBP28.39■■■□□ 2.13
HOXB3-201ENST00000311626 CTAGE6Q86UF2 777 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 CTAGE4Q8IX94 777 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 NGLY1Q96IV0 654 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 THAP9Q9H5L6 903 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 SLC39A2Q9NP94 309 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 EXOC1Q9NV70 894 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 DUSP10Q9Y6W6 482 aa28.39■■■□□ 2.13
HOXB3-201ENST00000311626 TBC1D8BQ0IIM8 1120 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 CAPZA3Q96KX2 299 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 ZMYND12Q9H0C1 365 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 PDE11AQ9HCR9 933 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 TNRC6CQ9HCJ0 1690 aaKnown RBP28.38■■■□□ 2.13
HOXB3-201ENST00000311626 ATP1A1P05023 1023 aaKnown RBP28.38■■■□□ 2.13
HOXB3-201ENST00000311626 TRIM21P19474 475 aaKnown RBP28.38■■■□□ 2.13
HOXB3-201ENST00000311626 GSTO1P78417 241 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 CYP27A1Q02318 531 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 BRD3Q15059 726 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 CCDC122Q5T0U0 273 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 CNOT6LQ96LI5 555 aaKnown RBP28.38■■■□□ 2.13
HOXB3-201ENST00000311626 CAPN11Q9UMQ6 739 aa28.38■■■□□ 2.13
HOXB3-201ENST00000311626 N4BP1O75113 896 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 UFL1O94874 794 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 EEF1GP26641 437 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 MTIF2P46199 727 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 ZNF804AQ7Z570 1209 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 P2RX5Q93086 422 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 COA7Q96BR5 231 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 MMTAG2Q9BU76 263 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 AMPD2Q01433 879 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 TSR1Q2NL82 804 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 RC3H1Q5TC82 1133 aaKnown RBP28.37■■■□□ 2.13
HOXB3-201ENST00000311626 DNAJC7Q99615 494 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 LACRTQ9GZZ8 138 aa28.37■■■□□ 2.13
HOXB3-201ENST00000311626 PPP4CP60510 307 aa28.36■■■□□ 2.13
HOXB3-201ENST00000311626 ROBO3Q96MS0 1386 aa28.36■■■□□ 2.13
HOXB3-201ENST00000311626 DYMQ7RTS9 669 aa28.36■■■□□ 2.13
HOXB3-201ENST00000311626 LEMD3Q9Y2U8 911 aa28.36■■■□□ 2.13
HOXB3-201ENST00000311626 NEK8Q86SG6 692 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 KIAA1328Q86T90 577 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 GJA10Q969M2 543 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 RRP36Q96EU6 259 aaKnown RBP28.35■■■□□ 2.13
HOXB3-201ENST00000311626 CD209Q9NNX6 404 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 SNED1Q8TER0 1413 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 SRGNP10124 158 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 SOGA3Q5TF21 947 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 CNBD1Q8NA66 436 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 MSANTD4Q8NCY6 345 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 HINFPQ9BQA5 517 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 C6orf50Q9HD87 102 aa28.35■■■□□ 2.13
HOXB3-201ENST00000311626 NOC4LQ9BVI4 516 aaKnown RBP28.34■■■□□ 2.13
HOXB3-201ENST00000311626 MAP2K7O14733 419 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 PLEKP08567 350 aaPredicted RBP28.34■■■□□ 2.13
HOXB3-201ENST00000311626 CCNE1P24864 410 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 DNM2P50570 870 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 PICALMQ13492 652 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 GALNT17Q6IS24 598 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 KRT25Q7Z3Z0 450 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 LRRC47Q8N1G4 583 aaKnown RBP28.34■■■□□ 2.13
HOXB3-201ENST00000311626 KIAA0895Q8NCT3 520 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 TRERF1Q96PN7 1200 aa28.34■■■□□ 2.13
HOXB3-201ENST00000311626 SEC63Q9UGP8 760 aaKnown RBP28.34■■■□□ 2.13
HOXB3-201ENST00000311626 MAST2Q6P0Q8 1798 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 A0A1W2PQC6 194 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 LDHCP07864 332 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 PRPHP41219 470 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 WHAMMP3Q1A5X7 153 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 FAM196AQ6ZSG2 479 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 C16orf86Q6ZW13 317 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 DHTKD1Q96HY7 919 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-201ENST00000311626 SEMA6BQ9H3T3 888 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 RAB21Q9UL25 225 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 MMS19Q96T76 1030 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 SPZ1Q9BXG8 430 aa28.33■■■□□ 2.13
HOXB3-201ENST00000311626 NHEJ1Q9H9Q4 299 aaPredicted RBP28.33■■■□□ 2.13
HOXB3-201ENST00000311626 MIIPQ5JXC2 388 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 KRT26Q7Z3Y9 468 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 MACROD2A1Z1Q3 448 aa28.32■■■□□ 2.12
HOXB3-201ENST00000311626 F8W031 263 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms