RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 GUCY2FP51841 1108 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 EPHB4P54760 987 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 HYOU1Q9Y4L1 999 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 PDS5AQ29RF7 1337 aaKnown RBP12.41□□□□□ -0.42
PTPN7-201ENST00000309017 PNPLA7Q6ZV29 1317 aa12.41□□□□□ -0.42
PTPN7-201ENST00000309017 KIF1AQ12756 1690 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 INF2Q27J81 1249 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 B4GALNT4Q76KP1 1039 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 ARL8AQ96BM9 186 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 MTA3Q9BTC8 594 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 ZBTB1Q9Y2K1 713 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 SRGNP10124 158 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 KIF5BP33176 963 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
PTPN7-201ENST00000309017 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 STIM2Q9P246 746 aa12.4□□□□□ -0.42
PTPN7-201ENST00000309017 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.43
PTPN7-201ENST00000309017 TROAPQ12815 778 aa12.4□□□□□ -0.43
PTPN7-201ENST00000309017 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.43
PTPN7-201ENST00000309017 IL17AQ16552 155 aa12.4□□□□□ -0.43
PTPN7-201ENST00000309017 P2RX5Q93086 422 aa12.4□□□□□ -0.43
PTPN7-201ENST00000309017 CCDC43Q96MW1 224 aaKnown RBP12.4□□□□□ -0.43
PTPN7-201ENST00000309017 PCDHA13Q9Y5I0 950 aa12.4□□□□□ -0.43
PTPN7-201ENST00000309017 ESYT3A0FGR9 886 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 GOLGA6L10A6NI86 522 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 EIF4A3P38919 411 aaKnown RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 GYG1P46976 350 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 RETREG2Q8NC44 543 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 OSBPL9Q96SU4 736 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 DDAH1O94760 285 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 KRT14P02533 472 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 KIF11P52732 1056 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 NNTQ13423 1086 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 MICALCLQ6ZW33 695 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 ADGRA1Q86SQ6 560 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 AENQ8WTP8 325 aaKnown RBP12.39□□□□□ -0.43
PTPN7-201ENST00000309017 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
PTPN7-201ENST00000309017 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CNTNAP5Q8WYK1 1306 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 FGFR2P21802 821 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 GUCY2DQ02846 1103 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 NFU1Q9UMS0 254 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CCNE1P24864 410 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 RASSF7Q02833 373 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 ARID5AQ03989 594 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 FUT2Q10981 343 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 IFT20Q8IY31 132 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 PIGBQ92521 554 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 DHTKD1Q96HY7 919 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CDK5RAP3Q96JB5 506 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 EPB41L5Q9HCM4 733 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN7-201ENST00000309017 MYH7P12883 1935 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 HNRNPH1P31943 449 aaKnown RBP12.38□□□□□ -0.43
PTPN7-201ENST00000309017 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 ODF2Q5BJF6 829 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CABP7Q86V35 215 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 CREG2Q8IUH2 290 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
PTPN7-201ENST00000309017 HPS3Q969F9 1004 aa12.38□□□□□ -0.43
PTPN7-201ENST00000309017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN7-201ENST00000309017 NID2Q14112 1375 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 MAP2K2P36507 400 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 CDR1P51861 262 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 MEA1Q16626 185 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 TTI2Q6NXR4 508 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 MMGT1Q8N4V1 131 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 KAT2BQ92831 832 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 YY1AP1Q9H869 796 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 NLRC4Q9NPP4 1024 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 SHOX2O60902 331 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-201ENST00000309017 HEXIM1O94992 359 aaKnown RBP12.37□□□□□ -0.43
PTPN7-201ENST00000309017 FCER1AP12319 257 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 PLCG1P19174 1290 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 ALS2CLQ60I27 953 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 ZIM3Q96PE6 472 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
PTPN7-201ENST00000309017 GUCY1A3Q02108 690 aa12.37□□□□□ -0.43
PTPN7-201ENST00000309017 CHRNDQ07001 517 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms