RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 PDE4DIPQ5VU43 2346 aa6.21□□□□□ -1.42
CKS1B-201ENST00000308987 CASP8AP2Q9UKL3 1982 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 HEG1Q9ULI3 1381 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 TAF1P21675 1872 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 METTL12A8MUP2 240 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 H0YIN7 160 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 DDNO94850 711 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 PIP4K2AP48426 406 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 POU4F3Q15319 338 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 NOM1Q5C9Z4 860 aaKnown RBP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 CENPQQ7L2Z9 268 aaPredicted RBP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 ZSWIM9Q86XI8 627 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF622Q969S3 477 aaKnown RBP eCLIP6.2□□□□□ -1.42
CKS1B-201ENST00000308987 BRIP1Q9BX63 1249 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF521Q96K83 1311 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 PASKQ96RG2 1323 aa6.2□□□□□ -1.42
CKS1B-201ENST00000308987 CEMIPQ8WUJ3 1361 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 SNED1Q8TER0 1413 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 CENPFP49454 3210 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 MKI67P46013 3256 aaKnown RBP6.19□□□□□ -1.42
CKS1B-201ENST00000308987 FOXN1O15353 648 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 TSPAN15O95858 294 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 PDGFAP04085 211 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 CYP11A1P05108 521 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 FAM87AP0C7U9 286 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 SRGNP10124 158 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 ECM1Q16610 540 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 AOC3Q16853 763 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF790Q6PG37 636 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 TTLL10Q6ZVT0 673 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 TRMT2AQ8IZ69 625 aaKnown RBP6.19□□□□□ -1.42
CKS1B-201ENST00000308987 LATS2Q9NRM7 1088 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 CRIM1Q9NZV1 1036 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 KNSTRNQ9Y448 316 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 U3KQE9 123 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 LTBP3Q9NS15 1303 aa6.19□□□□□ -1.42
CKS1B-201ENST00000308987 CNTNAP1P78357 1384 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 LAMB4A4D0S4 1761 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 LAMB2P55268 1798 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 KDM3BQ7LBC6 1761 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PHACTR2O75167 634 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 ATG7O95352 703 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 STARD3NLO95772 234 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PPP2R1AP30153 589 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 IL6STP40189 918 aaPredicted RBP6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PCDH1Q08174 1060 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 HP1BP3Q5SSJ5 553 aaPredicted RBP6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PEAR1Q5VY43 1037 aaPredicted RBP6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PRPF40BQ6NWY9 871 aaKnown RBP6.18□□□□□ -1.42
CKS1B-201ENST00000308987 CLP1Q92989 425 aaKnown RBP6.18□□□□□ -1.42
CKS1B-201ENST00000308987 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 USP16Q9Y5T5 823 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF541Q9H0D2 1346 aa6.18□□□□□ -1.42
CKS1B-201ENST00000308987 THSD7BQ9C0I4 1608 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 ECEL1O95672 775 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 PDE6BP35913 854 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 FMR1Q06787 632 aaKnown RBP eCLIP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 CDK5R2Q13319 367 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 WDR43Q15061 677 aaKnown RBP eCLIP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 KCNMB1Q16558 191 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 CC2D1BQ5T0F9 858 aaKnown RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 STYK1Q6J9G0 422 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 CCDC97Q96F63 343 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 LIN37Q96GY3 246 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 PPP1R16BQ96T49 567 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 TAOK3Q9H2K8 898 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 TAF1DQ9H5J8 278 aaPredicted RBP6.17□□□□□ -1.42
CKS1B-201ENST00000308987 ZFYVE1Q9HBF4 777 aa6.17□□□□□ -1.42
CKS1B-201ENST00000308987 A0A087WZG4 1122 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 MPSTP25325 297 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 MZF1P28698 734 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 SLFN5Q08AF3 891 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 CNGB1Q14028 1251 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 IFI16Q16666 785 aaKnown RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 SYDE1Q6ZW31 735 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 CNBD1Q8NA66 436 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 HELQQ8TDG4 1101 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 MASTLQ96GX5 879 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 HRASLS5Q96KN8 279 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 CRBNQ96SW2 442 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 SETDB2Q96T68 719 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 PRDM7Q9NQW5 492 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 ZNF277Q9NRM2 450 aaPredicted RBP6.16□□□□□ -1.42
CKS1B-201ENST00000308987 PPP1R9AQ9ULJ8 1098 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 BRCA2P51587 3418 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 HTTP42858 3142 aa6.16□□□□□ -1.42
CKS1B-201ENST00000308987 A0A096LPE4 126 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 A0A1W2PPZ6 126 aa6.15□□□□□ -1.42
CKS1B-201ENST00000308987 E9PSI1 815 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms