RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 MAP2K7O14733 419 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 LGR5O75473 907 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 HLTFQ14527 1009 aaKnown RBP eCLIP11.59□□□□□ -0.55
MSRB3-201ENST00000308259 HOOK3Q86VS8 718 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 ABCF2Q9UG63 623 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
MSRB3-201ENST00000308259 CYP2D7A0A087X1C5 515 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 CREB3O43889 395 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 ACBD5Q5T8D3 534 aaPredicted RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 CEP128Q6ZU80 1094 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 KRI1Q8N9T8 703 aaKnown RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 KDM4CQ9H3R0 1056 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 AATFQ9NY61 560 aaKnown RBP eCLIP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SPATA31A5Q5VU36 1347 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SPATA31A7Q8IWB4 1347 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 TFRCP02786 760 aaKnown RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SLC5A1P13866 664 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 TRIM65Q6PJ69 517 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 NOSTRINQ8IVI9 506 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 VSTM4Q8IW00 320 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 IFT81Q8WYA0 676 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SLC4A9Q96Q91 983 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SLC4A4Q9Y6R1 1079 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 CUL3Q13618 768 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 SPATA5Q8NB90 893 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 NUP88Q99567 741 aaPredicted RBP11.58□□□□□ -0.56
MSRB3-201ENST00000308259 UBAP1Q9NZ09 502 aa11.58□□□□□ -0.56
MSRB3-201ENST00000308259 ENC1O14682 589 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 DIAPH2O60879 1101 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 PDHA1P08559 390 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 MECOMQ03112 1051 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 FBXL16Q8N461 479 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC63Q8NA47 563 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 ZMAT2Q96NC0 199 aaKnown RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 IQCGQ9H095 443 aaKnown RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 VPS54Q9P1Q0 977 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CAMTA1Q9Y6Y1 1673 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 IKBKBO14920 756 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 PPFIA2O75334 1257 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 IFFO1Q0D2I5 559 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 POSTNQ15063 836 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 TAF11Q15544 211 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 TBC1D1Q86TI0 1168 aaPredicted RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 TRIML1Q8N9V2 468 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 EPSTI1Q96J88 318 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 ANKIB1Q9P2G1 1089 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 EVX2Q03828 476 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CACNA2D3Q8IZS8 1091 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 EZH1Q92800 747 aaPredicted RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 ABTB1Q969K4 478 aaPredicted RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 TCRBV5S4A2TA0A5A2 114 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 GOLGA8KD6RF30 607 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 TEX33O43247 280 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 PPP6R2O75170 966 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 SMTNP53814 917 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 SLC8A3P57103 927 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 SAFBQ15424 915 aaKnown RBP eCLIP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 RTN1Q16799 776 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 EARS2Q5JPH6 523 aaKnown RBP11.57□□□□□ -0.56
MSRB3-201ENST00000308259 SH2D3CQ8N5H7 860 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 MED15Q96RN5 788 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CCDC113Q9H0I3 377 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 CSRNP2Q9H175 543 aa11.57□□□□□ -0.56
MSRB3-201ENST00000308259 WNT7AO00755 349 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 BACH1O14867 736 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 UPP2O95045 317 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 IL6STP40189 918 aaPredicted RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 SEC24CP53992 1094 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 GUCY1A3Q02108 690 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 VGLL2Q8N8G2 317 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 A6NNZ2 444 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 GSG1L2A8MUP6 293 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 WTAPQ15007 396 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 TUBB8Q3ZCM7 444 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 TMTC2Q8N394 836 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 LRP2BPQ9P2M1 347 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 GLI3P10071 1580 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 AKR1B15C9JRZ8 316 aaPredicted RBP11.56□□□□□ -0.56
MSRB3-201ENST00000308259 UBE3CQ15386 1083 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 ARHGAP22Q7Z5H3 698 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 SLF2Q8IX21 1173 aa11.56□□□□□ -0.56
MSRB3-201ENST00000308259 STAMBPL1Q96FJ0 436 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms