RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 KIF4AO95239 1232 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 LDHCP07864 332 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
SEC23A-201ENST00000307712 TRAPPC10P48553 1259 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 HERC4Q5GLZ8 1057 aaPredicted RBP14.9□□□□□ -0.02
SEC23A-201ENST00000307712 FBXW10Q5XX13 1052 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 KIFC2Q96AC6 838 aa14.9□□□□□ -0.02
SEC23A-201ENST00000307712 DHTKD1Q96HY7 919 aaPredicted RBP14.9□□□□□ -0.02
SEC23A-201ENST00000307712 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 ZSCAN29Q8IWY8 852 aaPredicted RBP14.89□□□□□ -0.03
SEC23A-201ENST00000307712 CACNA2D3Q8IZS8 1091 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 NSRP1Q9H0G5 558 aaKnown RBP14.89□□□□□ -0.03
SEC23A-201ENST00000307712 INTS13Q9NVM9 706 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 HPCAL4Q9UM19 191 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 CCNE1P24864 410 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 ERVK-24P63145 666 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 E2F5Q15329 346 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 NLRP10Q86W26 655 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 MSANTD4Q8NCY6 345 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 DPH5Q9H2P9 285 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 GSG1L2A8MUP6 293 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 NR1D1P20393 614 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 PEX26Q7Z412 305 aa14.89□□□□□ -0.03
SEC23A-201ENST00000307712 PP2D1A8MPX8 630 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 NCK2O43639 380 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 CORO7P57737 925 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 LRRC41Q15345 812 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 EMBQ6PCB8 327 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 SH2D3CQ8N5H7 860 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 PAIP2Q9BPZ3 127 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 LRRC1Q9BTT6 524 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 THAP9Q9H5L6 903 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 LOC102724159A0A0B4J2E5 919 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 TBCAO75347 108 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 OR52Z1P0C646 297 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 ZNF18P17022 549 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 TOB1P50616 345 aaPredicted RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 PWP2Q15269 919 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 ALS2CLQ60I27 953 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 KRT25Q7Z3Z0 450 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 SPATS2Q86XZ4 545 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 BIN2Q9UBW5 565 aaPredicted RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 SMCO2A6NFE2 343 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 UBE4AQ14139 1066 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 CCDC65Q8IXS2 484 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 RSRC1Q96IZ7 334 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
SEC23A-201ENST00000307712 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 UTP11Q9Y3A2 253 aaKnown RBP14.88□□□□□ -0.03
SEC23A-201ENST00000307712 TMEM131LA2VDJ0 1609 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 CETN3O15182 167 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 DDAH1O94760 285 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 BMP6P22004 513 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 DPYDQ12882 1025 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 TBX2Q13207 712 aaPredicted RBP14.87□□□□□ -0.03
SEC23A-201ENST00000307712 PPP1R7Q15435 360 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 CCNI2Q6ZMN8 369 aaPredicted RBP14.87□□□□□ -0.03
SEC23A-201ENST00000307712 ADAT2Q7Z6V5 191 aaKnown RBP14.87□□□□□ -0.03
SEC23A-201ENST00000307712 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 KCNK9Q9NPC2 374 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 AGPAT5Q9NUQ2 364 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 IRAK1P51617 712 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 HLFQ16534 295 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 CALCRLQ16602 461 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 VIPAS39Q9H9C1 493 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 RASAL2Q9UJF2 1139 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 ANO9A1A5B4 782 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 FRMD3A2A2Y4 597 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 KRIT1O00522 736 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 PLCG1P19174 1290 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 NAA35Q5VZE5 725 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 ENAHQ8N8S7 591 aaPredicted RBP14.87□□□□□ -0.03
SEC23A-201ENST00000307712 UHMK1Q8TAS1 419 aaKnown RBP14.87□□□□□ -0.03
SEC23A-201ENST00000307712 SMARCAL1Q9NZC9 954 aa14.87□□□□□ -0.03
SEC23A-201ENST00000307712 BUB1BO60566 1050 aaPredicted RBP14.86□□□□□ -0.03
SEC23A-201ENST00000307712 IQCDQ96DY2 449 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
SEC23A-201ENST00000307712 SPATA4Q8NEY3 305 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 PPP1R3GB7ZBB8 358 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 EIF6P56537 245 aaKnown RBP14.86□□□□□ -0.03
SEC23A-201ENST00000307712 APBA1Q02410 837 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 CHRNDQ07001 517 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 GKAP1Q5VSY0 366 aaPredicted RBP14.86□□□□□ -0.03
SEC23A-201ENST00000307712 REXO1Q8N1G1 1221 aaKnown RBP14.86□□□□□ -0.03
SEC23A-201ENST00000307712 NDST4Q9H3R1 872 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 ZBTB1Q9Y2K1 713 aa14.86□□□□□ -0.03
SEC23A-201ENST00000307712 MYOCDQ8IZQ8 938 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 OSBPL9Q96SU4 736 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 GPCPD1Q9NPB8 672 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
SEC23A-201ENST00000307712 ALX1Q15699 326 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 NLRP3Q96P20 1036 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 SWAP70Q9UH65 585 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
SEC23A-201ENST00000307712 MAP2K7O14733 419 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms