RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CAP1Q01518 475 aa28.31■■■□□ 2.12
HOXC9-201ENST00000303450 SLC26A6Q9BXS9 759 aa28.31■■■□□ 2.12
HOXC9-201ENST00000303450 ACAD9Q9H845 621 aa28.31■■■□□ 2.12
HOXC9-201ENST00000303450 RBM27Q9P2N5 1060 aaKnown RBP28.31■■■□□ 2.12
HOXC9-201ENST00000303450 ABCB11O95342 1321 aa28.3■■■□□ 2.12
HOXC9-201ENST00000303450 PPFIA3O75145 1194 aa28.3■■■□□ 2.12
HOXC9-201ENST00000303450 TRIM22Q8IYM9 498 aa28.3■■■□□ 2.12
HOXC9-201ENST00000303450 RNF26Q9BY78 433 aaPredicted RBP28.3■■■□□ 2.12
HOXC9-201ENST00000303450 DOCK3Q8IZD9 2030 aa28.3■■■□□ 2.12
HOXC9-201ENST00000303450 PRPF3O43395 683 aaKnown RBP28.29■■■□□ 2.12
HOXC9-201ENST00000303450 STRNO43815 780 aa28.29■■■□□ 2.12
HOXC9-201ENST00000303450 GNRH1P01148 92 aa28.29■■■□□ 2.12
HOXC9-201ENST00000303450 FCER1AP12319 257 aa28.29■■■□□ 2.12
HOXC9-201ENST00000303450 HOXD10P28358 340 aa28.29■■■□□ 2.12
HOXC9-201ENST00000303450 SSRP1Q08945 709 aaKnown RBP28.29■■■□□ 2.12
HOXC9-201ENST00000303450 KCTD2Q14681 263 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 CCDC83Q8IWF9 413 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 MMP19Q99542 508 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 MRPL11Q9Y3B7 192 aaKnown RBP28.28■■■□□ 2.12
HOXC9-201ENST00000303450 PTPREP23469 700 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 MUM1L1Q5H9M0 696 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 TMX3Q96JJ7 454 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 PRDM10Q9NQV6 1147 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 TRIM17Q9Y577 477 aa28.28■■■□□ 2.12
HOXC9-201ENST00000303450 HEATR3Q7Z4Q2 680 aa28.27■■■□□ 2.12
HOXC9-201ENST00000303450 ANKRD35Q8N283 1001 aa28.27■■■□□ 2.12
HOXC9-201ENST00000303450 PLXNB2O15031 1838 aa28.26■■■□□ 2.12
HOXC9-201ENST00000303450 SLC15A5A6NIM6 579 aa28.26■■■□□ 2.11
HOXC9-201ENST00000303450 OTOP1Q7RTM1 612 aa28.26■■■□□ 2.11
HOXC9-201ENST00000303450 ABRAQ8N0Z2 381 aa28.26■■■□□ 2.11
HOXC9-201ENST00000303450 NUDT12Q9BQG2 462 aa28.26■■■□□ 2.11
HOXC9-201ENST00000303450 NFIBO00712 420 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 CTDNEP1O95476 244 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 SCG2P13521 617 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 ST3GAL1Q11201 340 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 GRB14Q14449 540 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 PFKFB3Q16875 520 aaPredicted RBP28.25■■■□□ 2.11
HOXC9-201ENST00000303450 NSMFQ6X4W1 530 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 SOCS4Q8WXH5 440 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 CLEC4DQ8WXI8 215 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 GPKOWQ92917 476 aaPredicted RBP eCLIP28.25■■■□□ 2.11
HOXC9-201ENST00000303450 DDX11Q96FC9 970 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 SRRDQ9UH36 339 aa28.25■■■□□ 2.11
HOXC9-201ENST00000303450 ADORA2AP29274 412 aa28.24■■■□□ 2.11
HOXC9-201ENST00000303450 MORN1Q5T089 497 aa28.24■■■□□ 2.11
HOXC9-201ENST00000303450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.24■■■□□ 2.11
HOXC9-201ENST00000303450 GJD2Q9UKL4 321 aa28.24■■■□□ 2.11
HOXC9-201ENST00000303450 ZNFX1Q9P2E3 1918 aaKnown RBP28.24■■■□□ 2.11
HOXC9-201ENST00000303450 hCG_1984214I3L0E3 225 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 DEXIO95424 95 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 PRKCZQ05513 592 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 PKN1Q16512 942 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 WWC2Q6AWC2 1192 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 MCF2L2Q86YR7 1114 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 ZNF713Q8N859 430 aaPredicted RBP28.23■■■□□ 2.11
HOXC9-201ENST00000303450 NSUN7Q8NE18 718 aaKnown RBP28.23■■■□□ 2.11
HOXC9-201ENST00000303450 A1CFQ9NQ94 594 aaKnown RBP28.23■■■□□ 2.11
HOXC9-201ENST00000303450 GABRQQ9UN88 632 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 DTNBO60941 627 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 FLT3LGP49771 235 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 CTU1Q7Z7A3 348 aaKnown RBP28.23■■■□□ 2.11
HOXC9-201ENST00000303450 DPP9Q86TI2 863 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 SNX21Q969T3 373 aa28.23■■■□□ 2.11
HOXC9-201ENST00000303450 LLPHQ9BRT6 129 aaKnown RBP28.23■■■□□ 2.11
HOXC9-201ENST00000303450 PFASO15067 1338 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 STK36Q9NRP7 1315 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 PTPDC1A2A3K4 754 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 PRMT2P55345 433 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 MAP2K5Q13163 448 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 BARHL2Q9NY43 387 aa28.22■■■□□ 2.11
HOXC9-201ENST00000303450 PGK2P07205 417 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 RGS2P41220 211 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 NAPAP54920 295 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 RNF207Q6ZRF8 634 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 RGS22Q8NE09 1264 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 SLC5A4Q9NY91 659 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 CYP39A1Q9NYL5 469 aa28.21■■■□□ 2.11
HOXC9-201ENST00000303450 ORC3Q9UBD5 711 aaPredicted RBP28.21■■■□□ 2.11
HOXC9-201ENST00000303450 STXBP3O00186 592 aa28.2■■■□□ 2.1
HOXC9-201ENST00000303450 JAK2O60674 1132 aa28.2■■■□□ 2.1
HOXC9-201ENST00000303450 CYP2B6P20813 491 aa28.2■■■□□ 2.1
HOXC9-201ENST00000303450 HSCBQ8IWL3 235 aa28.2■■■□□ 2.1
HOXC9-201ENST00000303450 USP6NLQ92738 828 aa28.2■■■□□ 2.1
HOXC9-201ENST00000303450 CFBP00751 764 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 BAATQ14032 418 aaPredicted RBP28.19■■■□□ 2.1
HOXC9-201ENST00000303450 PPP1R18Q6NYC8 613 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 RAET1EQ8TD07 263 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 WASF1Q92558 559 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 MAF1Q9H063 256 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 ZNF236Q9UL36 1845 aa28.19■■■□□ 2.1
HOXC9-201ENST00000303450 POTEB2H3BUK9 544 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 K7ELQ4 463 aaPredicted RBP28.18■■■□□ 2.1
HOXC9-201ENST00000303450 OPLAHO14841 1288 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 COBLO75128 1261 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 RPS6P62753 249 aaKnown RBP28.18■■■□□ 2.1
HOXC9-201ENST00000303450 CCDC12Q8WUD4 166 aaPredicted RBP28.18■■■□□ 2.1
HOXC9-201ENST00000303450 TBC1D5Q92609 795 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 CALML3P27482 149 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 TYW1BQ6NUM6 668 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 SLC30A10Q6XR72 485 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms