RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 BMP3P12645 472 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 MCM7P33993 719 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 CAP2P40123 477 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 TRAF1Q13077 416 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 IQCB1Q15051 598 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 INF2Q27J81 1249 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 NEK8Q86SG6 692 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 CUL5Q93034 780 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 TMEM39BQ9GZU3 492 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 PPP1R11O60927 126 aaPredicted RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 NT5DC1Q5TFE4 455 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 SYDE2Q5VT97 1194 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 TRIML1Q8N9V2 468 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 COA7Q96BR5 231 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 CNOT7Q9UIV1 285 aaKnown RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
TPM3-202ENST00000302206 ZNF541Q9H0D2 1346 aa13.63□□□□□ -0.23
TPM3-202ENST00000302206 A0A1W2PRG0 241 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 VWA3AA6NCI4 1184 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 ASNSP08243 561 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 SLC16A2P36021 539 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 TXLNAP40222 546 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 RASA3Q14644 834 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 POSTNQ15063 836 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
TPM3-202ENST00000302206 IL17AQ16552 155 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 QRICH1Q2TAL8 776 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 SPECC1Q5M775 1068 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 DTHD1Q6ZMT9 781 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
TPM3-202ENST00000302206 SH3RF1Q7Z6J0 888 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 AK8Q96MA6 479 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 SERTAD1Q9UHV2 236 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 HACL1Q9UJ83 578 aa13.62□□□□□ -0.23
TPM3-202ENST00000302206 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 PHF20L1A8MW92 1017 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 H7C1D1 291 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 ADCY5O95622 1261 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 OR52Z1P0C646 297 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 SARSP49591 514 aaKnown RBP13.61□□□□□ -0.23
TPM3-202ENST00000302206 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
TPM3-202ENST00000302206 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 CT47A1Q5JQC4 288 aaPredicted RBP13.61□□□□□ -0.23
TPM3-202ENST00000302206 SARM1Q6SZW1 724 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 USP49Q70CQ1 688 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 PNMA8AQ86V59 439 aaPredicted RBP13.61□□□□□ -0.23
TPM3-202ENST00000302206 IQUBQ8NA54 791 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 SPATA20Q8TB22 786 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 TBCKQ8TEA7 893 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 EPSTI1Q96J88 318 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 AMNQ9BXJ7 453 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 VCPKMTQ9H867 229 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
TPM3-202ENST00000302206 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
TPM3-202ENST00000302206 SMTNL1A8MU46 457 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 IKBKBO14920 756 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 NEMFO60524 1076 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 SMC2O95347 1197 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 GCFC2P16383 781 aaKnown RBP13.6□□□□□ -0.23
TPM3-202ENST00000302206 EPHX2P34913 555 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 ECE1P42892 770 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 PNOCQ13519 176 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 E2F4Q16254 413 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 JAKMIP3Q5VZ66 844 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 PAXIP1Q6ZW49 1069 aaPredicted RBP13.6□□□□□ -0.23
TPM3-202ENST00000302206 FAM160B2Q86V87 743 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 FBXO11Q86XK2 927 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
TPM3-202ENST00000302206 DHX40Q8IX18 779 aaKnown RBP13.6□□□□□ -0.23
TPM3-202ENST00000302206 CHURC1Q8WUH1 139 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 CCSER1Q9C0I3 900 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 TMEM60Q9H2L4 133 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 PCDHA1Q9Y5I3 950 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
TPM3-202ENST00000302206 A0A087X0B3 334 aa13.59□□□□□ -0.23
TPM3-202ENST00000302206 BECN2A8MW95 431 aa13.59□□□□□ -0.23
TPM3-202ENST00000302206 RAD21O60216 631 aa13.59□□□□□ -0.23
TPM3-202ENST00000302206 CCNT1O60563 726 aaKnown RBP13.59□□□□□ -0.23
TPM3-202ENST00000302206 CTNND1O60716 968 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms