RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ABRAQ8N0Z2 381 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 SPICE1Q8N0Z3 855 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 ATG4CQ96DT6 458 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 VCPKMTQ9H867 229 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 STX8Q9UNK0 236 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 ATP11BQ9Y2G3 1177 aa17.58■□□□□ 0.4
UBXN1-202ENST00000301935 KLF18A0A0U1RQI7 1052 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 CCDC196A0A1B0GTZ2 297 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 WDR46O15213 610 aaKnown RBP17.57■□□□□ 0.4
UBXN1-202ENST00000301935 DDAH1O94760 285 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 APOBRQ0VD83 1088 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 SNX17Q15036 470 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 RCSD1Q6JBY9 416 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 APOA5Q6Q788 366 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 SLC39A5Q6ZMH5 540 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 TMX3Q96JJ7 454 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 MAML3Q96JK9 1138 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 GUCD1Q96NT3 240 aa17.57■□□□□ 0.4
UBXN1-202ENST00000301935 SLKQ9H2G2 1235 aaPredicted RBP17.57■□□□□ 0.4
UBXN1-202ENST00000301935 GREB1LQ9C091 1923 aaPredicted RBP17.57■□□□□ 0.4
UBXN1-202ENST00000301935 ZBTB43O43298 467 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 NMT2O60551 498 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 PFKFB2O60825 505 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
UBXN1-202ENST00000301935 PDIA3P30101 505 aaKnown RBP17.56■□□□□ 0.4
UBXN1-202ENST00000301935 TMEM47Q9BQJ4 181 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 TPCN1Q9ULQ1 816 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 EYSQ5T1H1 3165 aa17.56■□□□□ 0.4
UBXN1-202ENST00000301935 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 TRIM60Q495X7 471 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 PRAMEF19Q5SWL8 479 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 PNMA1Q8ND90 353 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
UBXN1-202ENST00000301935 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
UBXN1-202ENST00000301935 PRDM5Q9NQX1 630 aaPredicted RBP17.55■□□□□ 0.4
UBXN1-202ENST00000301935 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
UBXN1-202ENST00000301935 BRPF3Q9ULD4 1205 aa17.55■□□□□ 0.4
UBXN1-202ENST00000301935 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 SLC25A27O95847 323 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 FCER1AP12319 257 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 EEF2P13639 858 aaKnown RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 KIF5BP33176 963 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 CUL4AQ13619 759 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 LRRC41Q15345 812 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 ME3Q16798 604 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 FAM161BQ96MY7 647 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 PDLIM7Q9NR12 457 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 RBM28Q9NW13 759 aaKnown RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 ADAMTS5Q9UNA0 930 aa17.54■□□□□ 0.4
UBXN1-202ENST00000301935 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-202ENST00000301935 NID2Q14112 1375 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
UBXN1-202ENST00000301935 ADCYAP1R1P41586 468 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 GNAQP50148 359 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBXN1-202ENST00000301935 TROAPQ12815 778 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 C1orf53Q5VUE5 145 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 NOL8Q76FK4 1167 aaKnown RBP17.53■□□□□ 0.4
UBXN1-202ENST00000301935 FANCBQ8NB91 859 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 CTCFLQ8NI51 663 aaPredicted RBP17.53■□□□□ 0.4
UBXN1-202ENST00000301935 MMP19Q99542 508 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
UBXN1-202ENST00000301935 GOPCQ9HD26 462 aa17.53■□□□□ 0.4
UBXN1-202ENST00000301935 CDKL5O76039 1030 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 SHHQ15465 462 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 C9orf50Q5SZB4 431 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 RIOX2Q8IUF8 465 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
UBXN1-202ENST00000301935 GMCL1P1Q8NEA9 526 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 BADQ92934 168 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 GTF3C6Q969F1 213 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 FERMT2Q96AC1 680 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 FBXO28Q9NVF7 368 aa17.52■□□□□ 0.4
UBXN1-202ENST00000301935 SMCHD1A6NHR9 2005 aa17.52■□□□□ 0.39
UBXN1-202ENST00000301935 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 RARBP10826 455 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 RTN1Q16799 776 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
UBXN1-202ENST00000301935 SH3RF1Q7Z6J0 888 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
UBXN1-202ENST00000301935 TINF2Q9BSI4 451 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 XPNPEP3Q9NQH7 507 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-202ENST00000301935 PPP1R9AQ9ULJ8 1098 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
UBXN1-202ENST00000301935 TRIM43BA6NCK2 446 aa17.5■□□□□ 0.39
UBXN1-202ENST00000301935 VWA5AO00534 786 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms