RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 CCAR2Q8N163 923 aaKnown RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 IMPACTQ9P2X3 320 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 IGSF3O75054 1194 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 ZNF18P17022 549 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 PRCPP42785 496 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 MYRIPQ8NFW9 859 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 NELFBQ8WX92 580 aa16.44■□□□□ 0.22
SMG8-201ENST00000300917 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMG8-201ENST00000300917 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
SMG8-201ENST00000300917 GALNT17Q6IS24 598 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 TAB2Q9NYJ8 693 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 SCN9AQ15858 1988 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 DPEP1P16444 411 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 CALCRLQ16602 461 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 SPATA1Q5VX52 437 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 DYMQ7RTS9 669 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 ABCB5Q2M3G0 1257 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 QRICH1Q2TAL8 776 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 KMT5BQ4FZB7 885 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 PCDHA1Q9Y5I3 950 aa16.43■□□□□ 0.22
SMG8-201ENST00000300917 PNMA6FA0A0J9YX94 578 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 SSBP05455 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMG8-201ENST00000300917 ASIC1P78348 528 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
SMG8-201ENST00000300917 ELOA2Q8IYF1 753 aaPredicted RBP16.42■□□□□ 0.22
SMG8-201ENST00000300917 NUDT12Q9BQG2 462 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 PSMD14O00487 310 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 PMS1P54277 932 aaKnown RBP16.42■□□□□ 0.22
SMG8-201ENST00000300917 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
SMG8-201ENST00000300917 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
SMG8-201ENST00000300917 F5H6K3 240 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 ERCC5P28715 1186 aaPredicted RBP16.41■□□□□ 0.22
SMG8-201ENST00000300917 ECE1P42892 770 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 KLRC3Q07444 240 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 LRWD1Q9UFC0 647 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
SMG8-201ENST00000300917 ZBTB5O15062 677 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 NRDCO43847 1150 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 PAK1Q13153 545 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 EDIL3O43854 480 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 FCER1AP12319 257 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 HMGB2P26583 209 aaKnown RBP16.41■□□□□ 0.22
SMG8-201ENST00000300917 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
SMG8-201ENST00000300917 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
SMG8-201ENST00000300917 SPECC1LQ69YQ0 1117 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 PRIMPOLQ96LW4 560 aa16.41■□□□□ 0.22
SMG8-201ENST00000300917 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 N4BP3O15049 544 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 IDEP14735 1019 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 NOVP48745 357 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 RAD51AP2Q09MP3 1159 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 MTF1Q14872 753 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 SYT10Q6XYQ8 523 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 CDK5RAP3Q96JB5 506 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
SMG8-201ENST00000300917 KANSL2Q9H9L4 492 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 MCM6Q14566 821 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 SLC30A10Q6XR72 485 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 GPIHBP1Q8IV16 184 aa16.4■□□□□ 0.22
SMG8-201ENST00000300917 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMG8-201ENST00000300917 A0A1W2PRG0 241 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 HOXA13P31271 388 aaPredicted RBP16.39■□□□□ 0.21
SMG8-201ENST00000300917 NT5C2P49902 561 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 PDE4DQ08499 809 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 CUL5Q93034 780 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 MMTAG2Q9BU76 263 aaKnown RBP16.39■□□□□ 0.21
SMG8-201ENST00000300917 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 NDUFB10O96000 172 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 GPATCH4Q5T3I0 446 aaKnown RBP16.39■□□□□ 0.21
SMG8-201ENST00000300917 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
SMG8-201ENST00000300917 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 ACER1Q8TDN7 264 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 KRT31Q15323 416 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 CCDC112Q8NEF3 446 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 SNX29Q8TEQ0 813 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
SMG8-201ENST00000300917 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 OGFOD1Q8N543 542 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 TMOD2Q9NZR1 351 aa16.38■□□□□ 0.21
SMG8-201ENST00000300917 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
SMG8-201ENST00000300917 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms