RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MSRAQ9UJ68 235 aa24.62■■□□□ 1.53
SMCO4-201ENST00000298966 TLR3O15455 904 aaKnown RBP24.61■■□□□ 1.53
SMCO4-201ENST00000298966 SNAI1O95863 264 aaPredicted RBP24.61■■□□□ 1.53
SMCO4-201ENST00000298966 CSF2RAP15509 400 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 CST5P28325 142 aaPredicted RBP24.61■■□□□ 1.53
SMCO4-201ENST00000298966 CDK7P50613 346 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 MRPS5P82675 430 aaKnown RBP24.61■■□□□ 1.53
SMCO4-201ENST00000298966 RAB30Q15771 203 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 MAMDC4Q6UXC1 1216 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 C16orf86Q6ZW13 317 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 RASEFQ8IZ41 740 aa24.61■■□□□ 1.53
SMCO4-201ENST00000298966 CYP2D7A0A087X1C5 515 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 A0A0U1RQG5 324 aaPredicted RBP24.6■■□□□ 1.53
SMCO4-201ENST00000298966 MYADML2A6NDP7 307 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 FGAP02671 866 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 CYP21A2P08686 494 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 SNRNP48Q6IEG0 339 aaKnown RBP24.6■■□□□ 1.53
SMCO4-201ENST00000298966 ZNF365Q70YC5 407 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 PPP1R12CQ9BZL4 782 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 ZSWIM6Q9HCJ5 1215 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 RAPGEFL1Q9UHV5 662 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 CYP46A1Q9Y6A2 500 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 SLC4A4Q9Y6R1 1079 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 MUC3AQ02505 3323 aa24.6■■□□□ 1.53
SMCO4-201ENST00000298966 USP17L12C9JPN9 530 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 USP17L21D6R901 530 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 ARVCFO00192 962 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 ZNF213O14771 459 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 FOXP2O15409 715 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 APPP05067 770 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 ASGR1P07306 291 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 ACRP10323 421 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 IGFBP4P22692 258 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 NEK4P51957 841 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 CCDC85BQ15834 202 aaPredicted RBP24.59■■□□□ 1.53
SMCO4-201ENST00000298966 ZNF467Q7Z7K2 595 aaPredicted RBP24.59■■□□□ 1.53
SMCO4-201ENST00000298966 IFNL3Q8IZI9 196 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 UHRF1Q96T88 793 aaPredicted RBP24.59■■□□□ 1.53
SMCO4-201ENST00000298966 SLF1Q9BQI6 1058 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 NAPBQ9H115 298 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 MTIF3Q9H2K0 278 aaKnown RBP24.59■■□□□ 1.53
SMCO4-201ENST00000298966 MCM3APO60318 1980 aa24.59■■□□□ 1.53
SMCO4-201ENST00000298966 SMIM22K7EJ46 135 aa24.58■■□□□ 1.53
SMCO4-201ENST00000298966 ACVR2BQ13705 512 aa24.58■■□□□ 1.53
SMCO4-201ENST00000298966 JAKMIP1Q96N16 626 aaKnown RBP24.58■■□□□ 1.53
SMCO4-201ENST00000298966 DNAJC25-GNG10A0A024R161 153 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 GSG1L2A8MUP6 293 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 SLC4A3P48751 1232 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 NT5C2P49902 561 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 GJA9P57773 515 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 IRX5P78411 483 aaPredicted RBP24.57■■□□□ 1.52
SMCO4-201ENST00000298966 ADGRE1Q14246 886 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 GNASQ5JWF2 1037 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 BLOC1S2Q6QNY1 142 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 RUFY3Q7L099 469 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 FAM126BQ8IXS8 530 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 NEK1Q96PY6 1258 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 UPF3AQ9H1J1 476 aaKnown RBP24.57■■□□□ 1.52
SMCO4-201ENST00000298966 ALDH8A1Q9H2A2 487 aaPredicted RBP24.57■■□□□ 1.52
SMCO4-201ENST00000298966 ABHD16BQ9H3Z7 469 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 IL23AQ9NPF7 189 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.57■■□□□ 1.52
SMCO4-201ENST00000298966 CTDP1Q9Y5B0 961 aaPredicted RBP24.57■■□□□ 1.52
SMCO4-201ENST00000298966 CHD9Q3L8U1 2897 aa24.57■■□□□ 1.52
SMCO4-201ENST00000298966 K7ELQ4 463 aaPredicted RBP24.56■■□□□ 1.52
SMCO4-201ENST00000298966 TSPYL2Q9H2G4 693 aaPredicted RBP24.56■■□□□ 1.52
SMCO4-201ENST00000298966 RIPK3Q9Y572 518 aa24.56■■□□□ 1.52
SMCO4-201ENST00000298966 GBF1Q92538 1859 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 PCP11498 1178 aaKnown RBP24.55■■□□□ 1.52
SMCO4-201ENST00000298966 CASTP20810 708 aaKnown RBP24.55■■□□□ 1.52
SMCO4-201ENST00000298966 TDO2P48775 406 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 ANKRD1Q15327 319 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 CCDC144BQ3MJ40 725 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 CPXCR1Q8N123 301 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 PRPF38AQ8NAV1 312 aaKnown RBP24.55■■□□□ 1.52
SMCO4-201ENST00000298966 HERVK_113Q902F9 699 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 NUP88Q99567 741 aaPredicted RBP24.55■■□□□ 1.52
SMCO4-201ENST00000298966 NKX2-4Q9H2Z4 354 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 SLC28A3Q9HAS3 691 aa24.55■■□□□ 1.52
SMCO4-201ENST00000298966 ZBED4O75132 1171 aa24.54■■□□□ 1.52
SMCO4-201ENST00000298966 CYP2C18P33260 490 aa24.54■■□□□ 1.52
SMCO4-201ENST00000298966 PLA2G5P39877 138 aa24.54■■□□□ 1.52
SMCO4-201ENST00000298966 ATP2A1O14983 1001 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 ADCY6O43306 1168 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
SMCO4-201ENST00000298966 FGBP02675 491 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 ANKRD35Q8N283 1001 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 FAM122AQ96E09 287 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 TTC14Q96N46 770 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 RNF41Q9H4P4 317 aaPredicted RBP24.53■■□□□ 1.52
SMCO4-201ENST00000298966 EPB41L4AQ9HCS5 686 aaPredicted RBP24.53■■□□□ 1.52
SMCO4-201ENST00000298966 WDR19Q8NEZ3 1342 aa24.53■■□□□ 1.52
SMCO4-201ENST00000298966 E7EWF7 191 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 RPS6KB1P23443 525 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 TRDNQ13061 729 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 ADCK5Q3MIX3 580 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 CTR9Q6PD62 1173 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 UPF3BQ9BZI7 483 aaKnown RBP24.52■■□□□ 1.52
SMCO4-201ENST00000298966 CNNM2Q9H8M5 875 aa24.52■■□□□ 1.52
SMCO4-201ENST00000298966 CXXC1Q9P0U4 656 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms