RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 SLC4A9Q96Q91 983 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 DUSP9Q99956 384 aaKnown RBP21.41■■□□□ 1.02
TRA2A-201ENST00000297071 TUBGCP2Q9BSJ2 902 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ENC1O14682 589 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 PHACTR2O75167 634 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ICE2Q659A1 982 aa21.41■■□□□ 1.02
TRA2A-201ENST00000297071 SUGP1Q8IWZ8 645 aaKnown RBP21.41■■□□□ 1.02
TRA2A-201ENST00000297071 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRA2A-201ENST00000297071 SECISBP2LQ93073 1101 aaKnown RBP21.41■■□□□ 1.02
TRA2A-201ENST00000297071 ATAD5Q96QE3 1844 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 GOLGA6BA6NDN3 693 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 NUTM2BA6NNL0 878 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-201ENST00000297071 NUTM2EB1AL46 878 aaPredicted RBP21.4■■□□□ 1.02
TRA2A-201ENST00000297071 TACC1O75410 805 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 TCP1P17987 556 aaKnown RBP21.4■■□□□ 1.02
TRA2A-201ENST00000297071 GGCXP38435 758 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 SKOR1P84550 965 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 EMBQ6PCB8 327 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 FOXR2Q6PJQ5 311 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 P2RX5Q93086 422 aa21.4■■□□□ 1.02
TRA2A-201ENST00000297071 RASSF10A6NK89 507 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 GNAQP50148 359 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 CHRNDQ07001 517 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 GLE1Q53GS7 698 aaKnown RBP21.39■■□□□ 1.02
TRA2A-201ENST00000297071 SUSD4Q5VX71 490 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 CAGE1Q8TC20 777 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 CAVIN3Q969G5 261 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 EDEM3Q9BZQ6 932 aa21.39■■□□□ 1.02
TRA2A-201ENST00000297071 TRIM49BA6NDI0 452 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 GOLGA6CA6NDK9 693 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 GOLGA6DP0CG33 693 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 IDEP14735 1019 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 PMS1P54277 932 aaKnown RBP21.39■■□□□ 1.01
TRA2A-201ENST00000297071 TBC1D8BQ0IIM8 1120 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 ORC2Q13416 577 aaPredicted RBP21.39■■□□□ 1.01
TRA2A-201ENST00000297071 CCDC178Q5BJE1 867 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 TADA2BQ86TJ2 420 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 CREG2Q8IUH2 290 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 LACRTQ9GZZ8 138 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 ATP8A2Q9NTI2 1148 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 GOLGA6AQ9NYA3 693 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 RNF14Q9UBS8 474 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 PLAGL2Q9UPG8 496 aa21.39■■□□□ 1.01
TRA2A-201ENST00000297071 PDE2AO00408 941 aaPredicted RBP21.38■■□□□ 1.01
TRA2A-201ENST00000297071 PJA2O43164 708 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 COL1A1P02452 1464 aaPredicted RBP21.38■■□□□ 1.01
TRA2A-201ENST00000297071 TRIM21P19474 475 aaKnown RBP21.38■■□□□ 1.01
TRA2A-201ENST00000297071 EPHB4P54760 987 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 APBA1Q02410 837 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 SPA17Q15506 151 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 BRINP3Q76B58 766 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 CSGALNACT2Q8N6G5 542 aa21.38■■□□□ 1.01
TRA2A-201ENST00000297071 hCG_1642624A0A1W2PR95 340 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 RCCD1A6NED2 376 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 COBLO75128 1261 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 UBA7P41226 1012 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 IRAK1P51617 712 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 SPATS2Q86XZ4 545 aaKnown RBP21.37■■□□□ 1.01
TRA2A-201ENST00000297071 C1orf131Q8NDD1 294 aaKnown RBP21.37■■□□□ 1.01
TRA2A-201ENST00000297071 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 TSKSQ9UJT2 592 aa21.37■■□□□ 1.01
TRA2A-201ENST00000297071 B4DLN1 442 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 SRGAP2O75044 1071 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 EVA1CP58658 441 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 FKBP15Q5T1M5 1219 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 EMC10Q5UCC4 262 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 PACS2Q86VP3 889 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 AGPAT5Q9NUQ2 364 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 ARPP21Q9UBL0 812 aaPredicted RBP21.36■■□□□ 1.01
TRA2A-201ENST00000297071 HYOU1Q9Y4L1 999 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 MIIPQ5JXC2 388 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 DGKHQ86XP1 1220 aa21.36■■□□□ 1.01
TRA2A-201ENST00000297071 CNOT6LQ96LI5 555 aaKnown RBP21.36■■□□□ 1.01
TRA2A-201ENST00000297071 BAZ2BQ9UIF8 2168 aaKnown RBP21.35■■□□□ 1.01
TRA2A-201ENST00000297071 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
TRA2A-201ENST00000297071 SNAP23O00161 211 aa21.35■■□□□ 1.01
TRA2A-201ENST00000297071 AMPD3Q01432 767 aa21.35■■□□□ 1.01
TRA2A-201ENST00000297071 CAPZA3Q96KX2 299 aa21.35■■□□□ 1.01
TRA2A-201ENST00000297071 CCDC42Q96M95 316 aa21.35■■□□□ 1.01
TRA2A-201ENST00000297071 CCDC194A0A1B0GVG4 234 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 EBAG9O00559 213 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 EIF3HO15372 352 aaKnown RBP eCLIP21.34■■□□□ 1.01
TRA2A-201ENST00000297071 ZEB2O60315 1214 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 MYBL2P10244 700 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 ALS2CR12Q96Q35 445 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 CAPS2Q9BXY5 557 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 MAPK8IP1Q9UQF2 711 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 FLT1P17948 1338 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 SRRM3A6NNA2 597 aaPredicted RBP21.34■■□□□ 1.01
TRA2A-201ENST00000297071 NTSR2O95665 410 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 FGFR1OPO95684 399 aaKnown RBP21.34■■□□□ 1.01
TRA2A-201ENST00000297071 GRM4Q14833 912 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 RNF10Q8N5U6 811 aaKnown RBP21.34■■□□□ 1.01
TRA2A-201ENST00000297071 SPATA4Q8NEY3 305 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 CRNKL1Q9BZJ0 848 aaKnown RBP21.34■■□□□ 1.01
TRA2A-201ENST00000297071 KAT14Q9H8E8 782 aa21.34■■□□□ 1.01
TRA2A-201ENST00000297071 JADE2Q9NQC1 790 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms