RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TRIM21P19474 475 aaKnown RBP10.46□□□□□ -0.74
PRDM9-201ENST00000296682 PRCPP42785 496 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 CRKP46108 304 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 ARID5AQ03989 594 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 KIF4BQ2VIQ3 1234 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 TOGARAM2Q6ZUX3 1019 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 CSGALNACT2Q8N6G5 542 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 DRC1Q96MC2 740 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 CARD6Q9BX69 1037 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 KANSL2Q9H9L4 492 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 SPATA31A6Q5VVP1 1343 aa10.46□□□□□ -0.74
PRDM9-201ENST00000296682 ATAD5Q96QE3 1844 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 CHMP2AO43633 222 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 OR52Z1P0C646 297 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 HOXA13P31271 388 aaPredicted RBP10.45□□□□□ -0.74
PRDM9-201ENST00000296682 CASQ1P31415 396 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 KRT9P35527 623 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 PDE6BP35913 854 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 MORC3Q14149 939 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 TMEM266Q2M3C6 531 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 SPATA1Q5VX52 437 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 VSTM4Q8IW00 320 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 SLF1Q9BQI6 1058 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 IMPACTQ9P2X3 320 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 PCDHA1Q9Y5I3 950 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 PSMA7O14818 248 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ZSCAN12O43309 604 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 MCM6Q14566 821 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ZNF579Q8NAF0 562 aaKnown RBP10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ENOX1Q8TC92 643 aaKnown RBP10.45□□□□□ -0.74
PRDM9-201ENST00000296682 PDGFDQ9GZP0 370 aaPredicted RBP10.45□□□□□ -0.74
PRDM9-201ENST00000296682 COA1Q9GZY4 146 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 PSTPIP2Q9H939 334 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 FCER1AP12319 257 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ADRA2BP18089 450 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 NOVP48745 357 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 CYP4A11Q02928 519 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 LARGE2Q8N3Y3 721 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ANKS1AQ92625 1134 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 OSBPL5Q9H0X9 879 aaPredicted RBP10.45□□□□□ -0.74
PRDM9-201ENST00000296682 MMRN2Q9H8L6 949 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 GUCA1BQ9UMX6 200 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 ATP6V0A2Q9Y487 856 aa10.45□□□□□ -0.74
PRDM9-201ENST00000296682 SIPA1L1O43166 1804 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 KCNJ18B7U540 433 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 STXBP3O00186 592 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 MEIS1O00470 390 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 IPO7O95373 1038 aaKnown RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SRGNP10124 158 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 RHBDL3P58872 404 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 DPYDQ12882 1025 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 KCNJ12Q14500 433 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SYCP1Q15431 976 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 ZNF569Q5MCW4 686 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 KRT79Q5XKE5 535 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SLFN13Q68D06 897 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 MTMR4Q9NYA4 1195 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 MKRN1Q9UHC7 482 aaKnown RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 TFR2Q9UP52 801 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 PPP2R2CQ9Y2T4 447 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 CTIFO43310 598 aaKnown RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 TTLL1O95922 423 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 CFBP00751 764 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 NPR1P16066 1061 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SLC35G1Q2M3R5 365 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 KRT25Q7Z3Z0 450 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SP8Q8IXZ3 490 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 ADGRF4Q8IZF3 695 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 GSDMAQ96QA5 445 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 DISC1Q9NRI5 854 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 SLU7O95391 586 aaKnown RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 PDHBP11177 359 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 TBC1D8BQ0IIM8 1120 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 PLS1Q14651 629 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 NPY5RQ15761 445 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 PRR16Q569H4 304 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 CT47A1Q5JQC4 288 aaPredicted RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 MAEAQ7L5Y9 396 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 OGFOD1Q8N543 542 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 ACRBPQ8NEB7 543 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 TNFRSF25Q93038 417 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 CSRNP1Q96S65 589 aa10.44□□□□□ -0.74
PRDM9-201ENST00000296682 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
PRDM9-201ENST00000296682 ARFGEF1Q9Y6D6 1849 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 DDTLA6NHG4 134 aaPredicted RBP10.43□□□□□ -0.74
PRDM9-201ENST00000296682 GH2P01242 217 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 ICA1Q05084 483 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 KRT31Q15323 416 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 C16orf86Q6ZW13 317 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 CPXCR1Q8N123 301 aa10.43□□□□□ -0.74
PRDM9-201ENST00000296682 FEZ1Q99689 392 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms