RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
HMGB2-201ENST00000296503 A1CFQ9NQ94 594 aaKnown RBP14.05□□□□□ -0.16
HMGB2-201ENST00000296503 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
HMGB2-201ENST00000296503 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 KIF5BP33176 963 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 QRICH1Q2TAL8 776 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 FBXO11Q86XK2 927 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 PFASO15067 1338 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 WDR19Q8NEZ3 1342 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 PTPDC1A2A3K4 754 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 DDAH1O94760 285 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 PSMA5P28066 241 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 CNTN2Q02246 1040 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 BLOC1S2Q6QNY1 142 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 HOMER1Q86YM7 354 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 MAP3K14Q99558 947 aa14.04□□□□□ -0.16
HMGB2-201ENST00000296503 SMCHD1A6NHR9 2005 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 ZNF236Q9UL36 1845 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 NFIBO00712 420 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CALM1P0DP23 149 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CALM2P0DP24 149 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CALM3P0DP25 149 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CPA1P15085 419 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CAPN2P17655 700 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 RXRAP19793 462 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 BAATQ14032 418 aaPredicted RBP14.03□□□□□ -0.16
HMGB2-201ENST00000296503 RAB11FIP4Q86YS3 637 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CCDC144CPQ8IYA2 1237 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 CNPY2Q9Y2B0 182 aa14.03□□□□□ -0.16
HMGB2-201ENST00000296503 IGHA2P01877 340 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 CYBAP13498 195 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 GNAQP50148 359 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.16
HMGB2-201ENST00000296503 MSL3Q8N5Y2 521 aaKnown RBP14.02□□□□□ -0.16
HMGB2-201ENST00000296503 FAM133AQ8N9E0 248 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 TRPV1Q8NER1 839 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 PIGSQ96S52 555 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 AMNQ9BXJ7 453 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 CRISPLD2Q9H0B8 497 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 RIOX1Q9H6W3 641 aa14.02□□□□□ -0.16
HMGB2-201ENST00000296503 DAXXQ9UER7 740 aaPredicted RBP14.02□□□□□ -0.16
HMGB2-201ENST00000296503 NAP1L2Q9ULW6 460 aaPredicted RBP14.02□□□□□ -0.16
HMGB2-201ENST00000296503 MRPL11Q9Y3B7 192 aaKnown RBP14.02□□□□□ -0.16
HMGB2-201ENST00000296503 ABCB11O95342 1321 aa14.02□□□□□ -0.17
HMGB2-201ENST00000296503 PLXNA1Q9UIW2 1896 aa14.02□□□□□ -0.17
HMGB2-201ENST00000296503 ZBTB5O15062 677 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 EIF5BO60841 1220 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 CASTP20810 708 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 CALML3P27482 149 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 SGMS1Q86VZ5 419 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 DDX20Q9UHI6 824 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 BRPF3Q9ULD4 1205 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 ASB14A6NK59 587 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 MSCO60682 206 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 ANO1Q5XXA6 986 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 LHX8Q68G74 356 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 Q6ZUG5 572 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 MICU3Q86XE3 530 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 FANCBQ8NB91 859 aa14.01□□□□□ -0.17
HMGB2-201ENST00000296503 ADD3Q9UEY8 706 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 BAZ2BQ9UIF8 2168 aaKnown RBP14.01□□□□□ -0.17
HMGB2-201ENST00000296503 RBBP6Q7Z6E9 1792 aaKnown RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 SYNGAP1Q96PV0 1343 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 PNMA6FA0A0J9YX94 578 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 SEPT4O43236 478 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 CYTH3O43739 400 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 FARP2O94887 1054 aaPredicted RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 SNAI1O95863 264 aaPredicted RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 RPS6KB1P23443 525 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 TRAF1Q13077 416 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 MCF2L2Q86YR7 1114 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 CMTR1Q8N1G2 835 aaKnown RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 CCDC82Q8N4S0 544 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 MTMR8Q96EF0 704 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 PURBQ96QR8 312 aaKnown RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 CDKN2AIPQ9NXV6 580 aaPredicted RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 NRBP1Q9UHY1 535 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 ZHX1Q9UKY1 873 aaPredicted RBP14□□□□□ -0.17
HMGB2-201ENST00000296503 OGDHLQ9ULD0 1010 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
HMGB2-201ENST00000296503 KLF18A0A0U1RQI7 1052 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ZBTB43O43298 467 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 SMARCA1P28370 1054 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ACVR2BQ13705 512 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 APOA5Q6Q788 366 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 ARMCX2Q7L311 632 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 TBC1D5Q92609 795 aa13.99□□□□□ -0.17
HMGB2-201ENST00000296503 RRP36Q96EU6 259 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms